Pairwise Alignments

Query, 485 a.a., nitrogenase molybdenum-iron protein alpha chain from Magnetospirillum magneticum AMB-1

Subject, 477 a.a., nitrogenase subunit alpha from Methanococcus maripaludis S2

 Score =  325 bits (834), Expect = 2e-93
 Identities = 180/462 (38%), Positives = 266/462 (57%), Gaps = 19/462 (4%)

Query: 25  EKSAKKRARHLGTVKTEENGTPTCGVKSNIKSVPGVMTVRGCAYAGAKGVVWGPVKDMVH 84
           +K   +R +H+  +K  +     C  + N  ++PG MT RGCA+AG KGV+ G +KD++H
Sbjct: 9   DKDIPEREQHI-YIKDSKEPKGHCKQRCNTNTIPGSMTERGCAFAGVKGVITGAIKDVLH 67

Query: 85  ISHGPIGCGQYSWSQRRNYFT------GTV-GIDSFVTMQVT-SDFQERDIVFGGDKNLE 136
           + H P+GC  Y     + Y T      G+V  +++F    +  +D  E D+VFGG   L+
Sbjct: 68  VVHSPVGCTAYGNGTTKRYPTRPEMPDGSVFPVENFNLKHIVGTDLTESDVVFGGMNKLK 127

Query: 137 VMIDELDGLFPLNNGISVLSECPIGLIGDDIEAVAKKKAKDIGKKVVPVRCEGFRGVSQS 196
            +I E    FP  N I V + C  GLIGDD++AV K+   ++GK VV     GF G +QS
Sbjct: 128 KVIREASKEFPFVNAIYVYATCTTGLIGDDLDAVCKEMQAELGKDVVAFNAPGFAGPTQS 187

Query: 197 LGHHIANDAIRDWVFEK--GTEEEWATGPYDVNLIADYNIGGDAWPSRKLLEEIGLRVIG 254
            GHH+ N  I    FEK  GT+E   T  YD+NLI +YNI GD W   K  E++G+ V+ 
Sbjct: 188 KGHHVGNYTI----FEKLVGTKEPPKTTDYDINLIGEYNIDGDYWVLEKYFEDMGINVLS 243

Query: 255 SWSGDATLAEIERAPKAKLNLIHCYRSMNYICRHMEEKYGMPWIEYNFFGPTQIAASLRK 314
            ++GDAT  E+    KAKL+L+ C RS  Y+ + +EEKYG+P+++ +FFGP   A +LR 
Sbjct: 244 KFTGDATHGELCWMHKAKLSLVRCQRSATYVAKLIEEKYGVPYLKVDFFGPEYCAENLRA 303

Query: 315 IAAAFDETIQKKAEEVIAKYQPLVDAVTARFKPRLDGKTVMLYVGGLRPRHTATAYED-L 373
           +   F + I+  AE VI K    +      +K +L GK + +  GG +  H +   E  L
Sbjct: 304 VGKYFGKEIE--AEAVIKKEMEKIQPELDFYKSKLQGKKIWISAGGPKSWHLSKPIEQYL 361

Query: 374 GMKIVGSGYEFAHNDDYQRTATYLKEGTLIYDDVSEFELEKFIEQLRPDLVGSGIKEKYS 433
           GM +V     F H D Y++     K+GT+I DD +  E+E+ +E+ +P++V  GIKEKY 
Sbjct: 362 GMDVVALSGLFEHEDGYEKMQERAKDGTIIIDDPNTLEMEEVVEKYQPEIVLGGIKEKYF 421

Query: 434 TQKMGVPFRQMHSWDYSGPYHGYDGFAIFARDMDMAINAPVW 475
             K+GVP   +HS++ +GPY G++GF   ARD+  AI  P W
Sbjct: 422 FHKLGVPSVMIHSYE-NGPYIGFEGFVNMARDIYTAIYNPAW 462