Pairwise Alignments

Query, 511 a.a., nitrogenase molybdenum-iron protein subunit beta from Magnetospirillum magneticum AMB-1

Subject, 458 a.a., nitrogenase from Methanococcus maripaludis S2

 Score =  265 bits (677), Expect = 3e-75
 Identities = 160/451 (35%), Positives = 243/451 (53%), Gaps = 26/451 (5%)

Query: 54  EKNFARTKAVINPHKACQPLGAVFAAAGFEETLPYVHGSQGCAAYFRSHLARHFKEASAC 113
           EK FA    VINP K CQP+GA+FA  G + ++P +HGS GC+ Y R  L RHFKEA   
Sbjct: 3   EKKFA----VINPCKICQPMGAIFALMGVKNSMPLIHGSHGCSTYMRFQLGRHFKEAVNV 58

Query: 114 VSDSMTEDAAVFGGLNNLVEGLLNAKHLYKPKMIAVSTTCMAEVIGDDLSAFIATAK-EK 172
            S SM+E  AV GG  NL   + N   +Y P++I V+T+C++E IGDD+   I   K + 
Sbjct: 59  ASSSMSEANAVLGGEENLKHAIRNVSKIYGPEIIGVTTSCLSETIGDDVEGIIRLFKTQN 118

Query: 173 ESVPADFPVPFAHTPSFVGSHTVGYDNMIKGIFNYFWDREKGEVKTGASNGKINIIPGFD 232
           + +P   P+    TPS+  +H  GYD+ +K +        K        N K+N+I G  
Sbjct: 119 DDLPEIVPI---STPSYKHTHVEGYDSTVKALVENLATPSK-------PNSKLNVITGM- 167

Query: 233 GYAVANNRELKRYLDAMGVDYTLVGDVSEVFDTPTDGTFR-MYDGGTKLDDVRDAINAKA 291
             +  +  E KR L  MG++  ++ D SE  D P DG    +   GT +++++D  N+ A
Sbjct: 168 -VSPGDIAETKRILREMGIESIILTDTSESMDAPFDGEVSFVSSAGTTVEELKDTANSFA 226

Query: 292 TLGLQHYCSDKTLEYVASKGQATASLNYPMGVSGTDAMLMKISELSGKAIPEAIEKERGR 351
           T+ L  + +        + G  + S   P+G+  TD  + ++ +L+ K IPE I +ERG+
Sbjct: 227 TISLCKHANSAAKFLHEAYGINSVSPYLPIGLQSTDEFMNELCKLTNKEIPEQITRERGK 286

Query: 352 LVDAIADSQGWLHGKKAAIFGDPDFVLSMASFLMELGIEPTHCLCTNAGKEWDAQMKAVL 411
           L+DA+ D+     G+K AI+GDPD V+    F++ELG+ P+     +  K +   +KAV 
Sbjct: 287 LIDAMIDAHQHNFGRKVAIYGDPDVVVGFTRFVLELGMIPSIVCTGSESKTFVEDIKAVT 346

Query: 412 AASPFGADCQVWAGKDLWHLRSLLFTEPTDMIIGSSYGKYLEKDTGIPLIRLTFPVFDRH 471
             S       + A  DL+ L   +     D++IG+SYG  +     IPLIR+ FP++DR 
Sbjct: 347 KDSKHKP--VILAPGDLYDLHQEIKKSKVDLLIGNSYGSRIAGAENIPLIRMGFPIYDRV 404

Query: 472 HHHRFPTMGYQGALRTLVE-----ILDRIFE 497
              R  ++GY   +R LV+     ILDR F+
Sbjct: 405 GAQRITSLGYTAGIR-LVDTITNTILDRYFD 434