Pairwise Alignments

Query, 511 a.a., nitrogenase molybdenum-iron protein subunit beta from Magnetospirillum magneticum AMB-1

Subject, 462 a.a., nitrogenase molybdenum-iron protein subunit beta from Methanococcus maripaludis S2

 Score =  283 bits (723), Expect = 1e-80
 Identities = 176/457 (38%), Positives = 248/457 (54%), Gaps = 30/457 (6%)

Query: 62  AVINPHKACQPLGAVFAAAGFEETLPYVHGSQGCAAYFRSHLARHFKEASACVSDSMTED 121
           AVINP   CQPLGA++A +G E  +P VHGSQGC+ + R   ARHF+E +     S+ ED
Sbjct: 13  AVINPIVTCQPLGAMYAVSGIERGMPLVHGSQGCSTFVRYGFARHFREPADIAVTSLHED 72

Query: 122 AAVFGGLNNLVEGLLNAKHLYKPKMIAVSTTCMAEVIGDDLSAFIATAKEK------ESV 175
           AAVFGG  NL+ GL N    +KP ++ V TTC +E+IGDD++ FI TAK +      E  
Sbjct: 73  AAVFGGRKNLISGLGNLAARFKPDVMGVVTTCSSEIIGDDVAGFIKTAKVEIAKKMGEEA 132

Query: 176 PADFPVPFAHTPSFVGSHTVGYDNMIKGIFNYFWDREKGEVKTGASNGKINIIPGFDGYA 235
                +   +TPSFV     GYDN IK I +   + +  E      NGK+NIIPG     
Sbjct: 133 ANKIKIVQINTPSFVEHQFKGYDNAIKAIVDTLAEPKDEE------NGKLNIIPGI--VN 184

Query: 236 VANNRELKRYLDAMGVDYTLVGDVSEVFDTP-----TDGTFRMYDGGTKLDDVRDAINAK 290
             + RE+K  L  MGV+  L+ D S+ FD+P      D       GGT L D++D  N+ 
Sbjct: 185 PGDIREIKHMLSLMGVEGILLTDTSDPFDSPLRPSKADKNPYYQKGGTPLADLQDCANSL 244

Query: 291 ATLGLQHYCSDKTLEYVASKGQATASLNYPMGVSGTDAMLMKISELSGKAIPEAIEKERG 350
            T+ L +Y +             +     P+G+  TD+ +  + + +G  + + I  ERG
Sbjct: 245 GTISLANYANSAPASLEKKYNMPSKVSEAPIGIQNTDSFIRTVKKFTGNDVTDEILDERG 304

Query: 351 RLVDAIAD-SQGWLHGKKAAIFGDPDFVLSMASFLMELGIEPTHCLCTNAGKEWDA-QMK 408
            ++DA+AD +  +L G+K AI+GDP   + MA F+ ELG+ P   +CT    E+    +K
Sbjct: 305 IVIDAMADVASRYLFGRKVAIYGDPSITVGMARFVAELGMIP-KVVCTGVKNEYFVNDLK 363

Query: 409 AVLAASPFGADCQVWAGKDLWHLRSLLFTEPTDMIIGSSYGKYLEKDTGIPLIRLTFPVF 468
            V  A     D     G+DL  L   L   P D++IGSS G+ + KD GIPL R+ +PV+
Sbjct: 364 KV--AKESDEDIDALFGQDLRALDVYLKENPVDLMIGSSDGRLMAKDLGIPLYRVGYPVY 421

Query: 469 DRHHHHRFPTMGYQGALRTLVE-----ILDRIFEVAD 500
           DR  + R P +GY GAL  LV+     ILD+ +E  D
Sbjct: 422 DRVGYQRRPIIGYNGAL-NLVDGITNTILDKYYETQD 457