Pairwise Alignments

Query, 460 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Magnetospirillum magneticum AMB-1

Subject, 477 a.a., nitrogenase subunit alpha from Methanococcus maripaludis S2

 Score =  215 bits (547), Expect = 3e-60
 Identities = 138/444 (31%), Positives = 230/444 (51%), Gaps = 27/444 (6%)

Query: 23  EGERKKGCGKSLTPGAAAG-GCAFDGAK-IALQPITDVVHLVHGPIACE--GNS----WD 74
           +G  K+ C  +  PG+    GCAF G K +    I DV+H+VH P+ C   GN     + 
Sbjct: 28  KGHCKQRCNTNTIPGSMTERGCAFAGVKGVITGAIKDVLHVVHSPVGCTAYGNGTTKRYP 87

Query: 75  GRNSWSSGSDLYRKGFT------TDLTNLDIIAGGEKKLYKAIKQAIARHNP--PAVFVY 126
            R     GS    + F       TDLT  D++ GG  KL K I++A ++  P   A++VY
Sbjct: 88  TRPEMPDGSVFPVENFNLKHIVGTDLTESDVVFGGMNKLKKVIREA-SKEFPFVNAIYVY 146

Query: 127 QTCVGSLIGDDVDAVCRAATQRLGTPVIPINSPGFVG-SKNLGNRLGGEALFEHVIGTVE 185
            TC   LIGDD+DAVC+     LG  V+  N+PGF G +++ G+ +G   +FE ++GT E
Sbjct: 147 ATCTTGLIGDDLDAVCKEMQAELGKDVVAFNAPGFAGPTQSKGHHVGNYTIFEKLVGTKE 206

Query: 186 PDDAGPCDINILGEYNVAGELDQFRPLLARLGIRLRASITGDARYREVAACHTARANMVL 245
           P      DIN++GEYN+ G+          +GI + +  TGDA + E+   H A+ ++V 
Sbjct: 207 PPKTTDYDINLIGEYNIDGDYWVLEKYFEDMGINVLSKFTGDATHGELCWMHKAKLSLVR 266

Query: 246 CSQALVTLARKMKEKWGIPYFEGSFYGISDTSDALRNIARMLVERGADPTLTDRTEALIA 305
           C ++   +A+ ++EK+G+PY +  F+G    ++ LR + +   +           EA+I 
Sbjct: 267 CQRSATYVAKLIEEKYGVPYLKVDFFGPEYCAENLRAVGKYFGKE-------IEAEAVIK 319

Query: 306 EEEAKAWARLEPYKARLAGRKVLLYTGGVKSWSVIQALQE-VGMEVVGSSVRKATEADKS 364
           +E  K    L+ YK++L G+K+ +  GG KSW + + +++ +GM+VV  S     E    
Sbjct: 320 KEMEKIQPELDFYKSKLQGKKIWISAGGPKSWHLSKPIEQYLGMDVVALSGLFEHEDGYE 379

Query: 365 KALERLGGDEDKLADAITPRDMYAMFKDGKADMMLSGGRSQFVALKARTPWIDINQERHH 424
           K  ER   D   + D     +M  + +  + +++L G + ++   K   P + I+   + 
Sbjct: 380 KMQER-AKDGTIIIDDPNTLEMEEVVEKYQPEIVLGGIKEKYFFHKLGVPSVMIHSYENG 438

Query: 425 GYAAYDGMVALVREIDLSINSPIW 448
            Y  ++G V + R+I  +I +P W
Sbjct: 439 PYIGFEGFVNMARDIYTAIYNPAW 462