Pairwise Alignments

Query, 576 a.a., chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (262), Expect = 4e-27
 Identities = 93/308 (30%), Positives = 143/308 (46%), Gaps = 33/308 (10%)

Query: 61  YGVTKEEAAKSSGMREGVNMGVDFEGTRLINFGIAGPLETVRPLARIVRFCVTSLLRIRQ 120
           Y  T++ A      R G + G D  GT  I   +   ++T+  L          ++ ++Q
Sbjct: 153 YTTTQKIAEGDLTSRLGFHPGRDEFGT--IGCALDKAMDTLAEL----------IVAVKQ 200

Query: 121 EETTI---VAAFARETGGIGKQMIEIAEDIDEVATKVADQHALLAELQQGIRALSDANQR 177
              T+      FA E      Q+      +D VAT + +  A  AE+       S  +QR
Sbjct: 201 NSATLRDTAMTFAHEVKESEVQIQNQYSSLDSVATAMEEMTASAAEV-------STTSQR 253

Query: 178 IVAAMEETLAGATAASAEAETSRQRVRGSLGDIDEVVRMVTDGRGLLLDLQDAMGNVVGV 237
                E+        + + E S+QRVR ++ DI+++ R +      +  L      +  V
Sbjct: 254 ATEQTEQD-------TKQVERSQQRVRKAIQDIEQLSRYIAQASSSVETLNTNATQINAV 306

Query: 238 AQGIGHIARQTNLLALNATIEAARAGEHGKGFAVVAGEVKELSRRAGSASAEIRQTLEGL 297
              I  I+ QTNLLALNA IEAARAGE G+GFAVVA EV+ L+ R  SA+ EI+  +E L
Sbjct: 307 ITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQSATVEIQAMIEKL 366

Query: 298 ---TGTAGKLVEQGDHSATKAGGLTAETAAIADTMDHIRTSLAEMAGRVENVAADASSI- 353
              +    KL EQ    A  +  L +E       + H    + +++ ++   A++ SS+ 
Sbjct: 367 QVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQAIAHSAQLINDLSVQISTSASEQSSVA 426

Query: 354 HDRSSGLS 361
           HD SS LS
Sbjct: 427 HDISSELS 434