Pairwise Alignments

Query, 576 a.a., chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score = 96.3 bits (238), Expect = 3e-24
 Identities = 79/289 (27%), Positives = 134/289 (46%), Gaps = 28/289 (9%)

Query: 125 IVAAFARETGGIGKQMIEIAEDIDEVATKVADQHALLAELQQGIRALSDANQRIVAAMEE 184
           I   F R +G +   M++I++    +++ +        E +Q + + S    ++V A+ +
Sbjct: 349 ISEGFNRFSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQ 408

Query: 185 TLAGAT--------------AASAEAETSRQRVRGSLGDIDEVVRMVTDGRGLLLDLQDA 230
               A               AAS EA+ S   V  ++  +  +V  V +    + ++   
Sbjct: 409 MSESARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRD 468

Query: 231 MGNVVGVAQGIGHIARQTNLLALNATIEAARAGEHGKGFAVVAGEVKELSRRAGSASAEI 290
              +  V   IG I+ QTNLLALNA IEAARAGE G+GFAVVA EV+ L+ R  +++ EI
Sbjct: 469 ANKISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEI 528

Query: 291 RQTLEGLTGTAGKLVEQGDHSATKAGGLTAETAAIADTMDHIRTSLAEMAGRVENVAADA 350
              L        KL+E  D   +  G +         T D      +E++G +  ++A  
Sbjct: 529 SDMLT-------KLLEGTD---SVVGAMERTKQQCQTTAD----KTSEVSGSLNMMSASV 574

Query: 351 SSIHDRSSGLSAEIDQAAEALAEFRTRLDATRSRLQDLLDAGERLVVLT 399
           S I D S+ ++A  +Q +   AE    + + R  ++ L+ +G + V  T
Sbjct: 575 SDIDDLSTQIAAATEQQSTVAAELSRNMLSIREIVESLVVSGRQTVGAT 623



 Score = 29.6 bits (65), Expect = 4e-04
 Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 4/106 (3%)

Query: 112 VTSLLRIRQEETTIVAAFAR-ETGGIGKQMIEIAEDIDEVATKVADQHALLAELQQGIRA 170
           V S++    E+T ++A  A  E    G+Q    A   DEV    A       E+   +  
Sbjct: 475 VLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTK 534

Query: 171 LSDANQRIVAAMEETLAGATAA---SAEAETSRQRVRGSLGDIDEV 213
           L +    +V AME T          ++E   S   +  S+ DID++
Sbjct: 535 LLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDL 580