Pairwise Alignments

Query, 576 a.a., chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score = 98.6 bits (244), Expect = 7e-25
 Identities = 78/264 (29%), Positives = 119/264 (45%), Gaps = 14/264 (5%)

Query: 124 TIVAAFARETGGIGKQMIEIAEDIDEVATKVADQHALLAELQQGIRALSDANQRIVAAME 183
           T+V   +  +  + +Q    A   +E ++++  Q   +  +   I  ++ A Q I    +
Sbjct: 351 TMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNAD 410

Query: 184 ETLAGATAASAEAETSRQRVRGSLGDIDEVVRMVTDGRGLLLDLQDAMGNVVGVAQGIGH 243
            T   A  A         +V  +   I  +   V     ++ +L+     +  +   I +
Sbjct: 411 HTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQN 470

Query: 244 IARQTNLLALNATIEAARAGEHGKGFAVVAGEVKELSRRAGSASAEIRQTLEGLTGTAGK 303
           IA QTNLLALNA IEAARAGE G+GFAVVA EV+ LS+R  +++ EI+Q +E L  T GK
Sbjct: 471 IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGK 530

Query: 304 LV-------EQGDHSATKAGGLTAETAAIADTMDHIRTSLAEMAGRVENVAADAS----- 351
            V          D S   A   +     I  T++ I     ++A   E  A+  S     
Sbjct: 531 AVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRN 590

Query: 352 --SIHDRSSGLSAEIDQAAEALAE 373
              I D S+ L+ E   AAE  AE
Sbjct: 591 TVGIRDVSNDLAQEAHSAAEQAAE 614



 Score = 30.0 bits (66), Expect = 3e-04
 Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 5/149 (3%)

Query: 112 VTSLLRIRQEETTIVAAFAR-ETGGIGKQMIEIAEDIDEVATKVADQHALLAELQQGIRA 170
           + S ++   E+T ++A  A  E    G+Q    A   DEV       HA   E+QQ I  
Sbjct: 464 ILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIET 523

Query: 171 LSDANQRIVAAMEET--LAGATAASA-EAETSRQRVRGSLGDIDEVVRMVTDGRGLLLDL 227
           L     + V  M+++  LA  +   A EA  S +++  ++  I ++   +         +
Sbjct: 524 LQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASV 583

Query: 228 -QDAMGNVVGVAQGIGHIARQTNLLALNA 255
             +   N VG+      +A++ +  A  A
Sbjct: 584 TSEITRNTVGIRDVSNDLAQEAHSAAEQA 612