Pairwise Alignments

Query, 576 a.a., chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 478 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  105 bits (261), Expect = 5e-27
 Identities = 97/337 (28%), Positives = 156/337 (46%), Gaps = 40/337 (11%)

Query: 61  YGVTKEEAAKSSGMREGVNMGVDFEGTRLINFGIAGPLETVRPLARIVRFCVTSLLRIRQ 120
           Y  T++  +     R G + G D  GT  I   +   ++T+  L ++V+    +L    +
Sbjct: 157 YTTTEKIGSGDLTSRLGFHPGRDEFGT--IGCALDKAMDTLTELVKVVKANADTLSDTSE 214

Query: 121 EETTIVAAFARETGGIGKQMIEIAEDIDEVATKVADQHALLAELQQGIRALSDANQRIVA 180
                  +F RE     +Q+      +D VAT + +  A   E+    R           
Sbjct: 215 -------SFEREMKQSLQQINRQYVSLDSVATAMEEMTASAQEVSNISRQ---------- 257

Query: 181 AMEETLAGATAASAEAETSRQRVRGSLGDIDEVVRMVTDGRGLLLDLQDAMGNVVGVAQG 240
           A E+T   AT    + E+S QRV+ ++ DI+++  ++      +  L      +  V   
Sbjct: 258 ATEKTEQDAT----QVESSFQRVQKAISDIEQLSGLIEQASSSVATLNVNTTQINEVITT 313

Query: 241 IGHIARQTNLLALNATIEAARAGEHGKGFAVVAGEVKELSRRAGSASAEIRQTLEGLTGT 300
           I  I+ QTNLLALNA IEAARAGE G+GFAVVA EV+ L+ R  +A+ EI+  +E L G 
Sbjct: 314 INAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQAATVEIQAMIEKLQGE 373

Query: 301 A-------GKLVEQGDHSA-------TKAGGLTAETAAIADTMDHIRTSLAEMAGRVENV 346
           +        K V Q   S+           G+   + AI D    I TS  E +    ++
Sbjct: 374 SRNIANITEKTVSQAQSSSGVIANIGADVRGIADSSRAITDMSIQISTSAEEQSSVANSI 433

Query: 347 AADASSIHDRSSGLSAEIDQAAEALAEFRTRLDATRS 383
           AA+ S I ++S+ +    +Q++E +A      +A+RS
Sbjct: 434 AAELSDIRNQSNTIRTVAEQSSEGVARL---AEASRS 467