Pairwise Alignments

Query, 500 a.a., acyl-CoA synthetase AMP-fatty acid ligase from Magnetospirillum magneticum AMB-1

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  144 bits (364), Expect = 6e-39
 Identities = 127/507 (25%), Positives = 218/507 (42%), Gaps = 44/507 (8%)

Query: 30  TYDQLNRLACRFGNAMLAAGVQRQQPVLLLLDDGPELVAAYLGAMKAGLVAVALNTRLSP 89
           TY + +         +L  G+++   + +   + P+ +       K G+V V +NT    
Sbjct: 35  TYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFMFATAKIGVVLVTVNTAYKS 94

Query: 90  KDLSHALGDSGAPLLLAETALKD-----LAAESLALAHASAR------------------ 126
            +L++ +  S    L    + +D     +  E +     S R                  
Sbjct: 95  HELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKTSQRGKLNSEEFPYLKNVIYVG 154

Query: 127 ------MVTTDELDAFLEGASDQ-LVSADMG--PEDMALWMYTSGTTGQPKGAVHVHGSI 177
                 M  T EL       SD+ L+ A  G   +D+    YTSGTTG PKG +  H +I
Sbjct: 155 QEKHRGMYNTTELMLLGNYVSDEKLIEAKKGLDSDDVINMQYTSGTTGFPKGVMLTHKNI 214

Query: 178 PLGERHVRENLGLLPGDRIFSTSKLFFAYPLGHCLIGALRCGGTLVLHRGWPDATAAAEV 237
                ++ E       +R+     LF  + +   ++  L  GGTLV+   + D       
Sbjct: 215 LNNGYYIGEKQKFTEEERLCLPVPLFHCFGIVLGVLALLTHGGTLVMLEIF-DPLLVLAA 273

Query: 238 IARTRPKLVLSVPSLYRIMLKDGVGSSPAFREVRTWVSAGENLPADLCRRWMEETGGLML 297
           I + +   V  VP+++       +        +RT + AG   P +  ++ M +    M 
Sbjct: 274 IQKEKCTAVYGVPTMFIAEFSHPMFEMFDLSSLRTGIMAGSTCPIEAMKKVMSDM--YMR 331

Query: 298 E---GIGATEALFLFIAST---PTAMKPGACGRPLPWAEAQLRSPSGEVIAAPDTPGDLW 351
           E     G TEA  +F  ++   P   +  + G+ +P  E ++  P      AP   G++ 
Sbjct: 332 EITISYGLTEASPVFTMTSVDDPFEKRVESVGKAMPHCEVKIIDPETGETLAPGNVGEIC 391

Query: 352 VRMDSLFRRYHNRPDVTQRVL-KDGWWKTGDVFSFDAEGWWSPQGRSDDMIKVSGQWVSP 410
            R  ++ + Y+  P+ T  V+ KDGW  +GD+   D +G++   GR  DMI   G+ + P
Sbjct: 392 CRGYNVMKGYYKMPEKTAEVIEKDGWLHSGDLAVEDEDGYYKIVGRIKDMIIRGGENIYP 451

Query: 411 SEVEEAALMVPGVADAVAVGIPNEDGLVRLVLYAVAEAGEHEPLLETRIVETLRSKLAIY 470
            E+EE    +PG+ DA  VGIP+E     +  + + + G    + E  + +    K+A Y
Sbjct: 452 REIEEFLYTMPGINDAQVVGIPDEKYGEIVGAFVIPKEGYE--IKEEDVRDFALEKIARY 509

Query: 471 KCPRNVRFLETIPRTATGKVQRFKLRE 497
           K P++V  +E  P TA+GK+Q+FKL E
Sbjct: 510 KVPKHVFVVEEFPMTASGKIQKFKLTE 536