Pairwise Alignments

Query, 671 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 688 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  222 bits (565), Expect = 5e-62
 Identities = 152/367 (41%), Positives = 202/367 (55%), Gaps = 15/367 (4%)

Query: 205 LGVLVNLLVALAI--GAYATGLFRRL-GTDIAVVMEERE-AAPHLSADRHDEFGPIARAL 260
           LG+ V ++  + I  G   T     L  T +      RE A PH   DR DE G +A+AL
Sbjct: 322 LGLAVGIVAVIIIVTGRRVTAPLDHLTATIVDFAQGAREFAVPH--TDRRDEIGRMAKAL 379

Query: 261 ALFRERSAEVKALQARRQSAEAAAEAERRAALLSMADTVEIETASAVENVASEGDRVSHS 320
            + R  +      QA+    E  A  +RR       + V  E   +++ V +   R +  
Sbjct: 380 EVLRGNALAADT-QAKHAEDERLARDQRR----QKTEVVTSEFVGSIDGVVAGVTRAAEQ 434

Query: 321 ASAMAQSAQSVGELS----QAVAAAAEQALSNAQTVAGASEELSASIQEIARQVAQSNAA 376
             A  +S     ELS    + VA A+E A +N QTVA A+EELS SIQEI+R+VA++ A 
Sbjct: 435 LRAETKSLLQTSELSSRQSEVVATASEDASANVQTVAAAAEELSNSIQEISRRVAETAAT 494

Query: 377 VERVVSQANETSSIVDSLTGAMDKIGDVASMIAEVANHTNLLALNATIEAARAGDAGKGF 436
            +  V QA  T+++V SLT A+ KIGDV  +I+++A+ TNLLALNATIEAARAGDAGKGF
Sbjct: 495 TDGAVQQAESTNAMVRSLTEAVRKIGDVVKLISDIASQTNLLALNATIEAARAGDAGKGF 554

Query: 437 AVVANEVKNLANQTSKSTEEISRQVGTLQGVGREVAASISQMIDTVHEVEGMASSIAAAV 496
           AVVA EVK LANQT+K+TE+I  QV  +Q        +I  +  T+  V      IAAAV
Sbjct: 555 AVVAGEVKTLANQTAKATEDIQSQVAAIQVETERATTAIGAITATIAAVNQHTIGIAAAV 614

Query: 497 RQQDCATREIARNVVETSAAAKEVSEHIATVAAEASSTGQRASEVQDLLHHMAGRIRELR 556
            QQ  AT EIARNV + +    EVS  I  V   A  TG  A+++  L   +AG    L 
Sbjct: 615 EQQGAATTEIARNVQQAANGTAEVSSSIGKVLEAAHQTGAAATKLSKLADSLAGDSTLLD 674

Query: 557 QSVNAAV 563
           Q+V   V
Sbjct: 675 QTVGGFV 681