Pairwise Alignments

Query, 584 a.a., permease from Magnetospirillum magneticum AMB-1

Subject, 446 a.a., SLC13 family permease from Methanococcus maripaludis S2

 Score =  115 bits (288), Expect = 4e-30
 Identities = 60/192 (31%), Positives = 103/192 (53%), Gaps = 4/192 (2%)

Query: 393 WLPVGIAFAAMLSVAVGVMPVAPAFFLAAVAMVLLGCLPLRGAYEAIHWPIIILLGALIP 452
           W+   +    +L  A G +P+  AF L A  +V+ GC+ ++ A+ +I W  I L   ++P
Sbjct: 257 WIATLVFTFVVLMTATGTIPLVTAFMLGACMVVMTGCITMQEAFNSISWTTIFLFAGMLP 316

Query: 453 ISDSMKSTGASDLLAGWLALAASQVPVPMAL-GLVLLASMLLAPFLHHAATVLLMGPVAA 511
           +  +M +TGA+ ++A  +    + V  P+AL     + + L+   + + AT  L+ P+  
Sbjct: 317 LGSAMAATGAATMIANTVI---TYVHSPLALLAAAYILTALITEVMSNTATAALVMPLGI 373

Query: 512 GMAVKLGLAVDPFLMAVALGAASDFLTPIGHQCNTLVMGVGGYRFGDYWRLGLPLSVIVL 571
            +A    ++  P LMA+A+ A+S FLTPI    N +++G GGY F DY + G PL ++  
Sbjct: 374 ALADAFDVSAKPILMAIAVAASSCFLTPIATPPNMIILGPGGYSFKDYAKSGWPLEILCA 433

Query: 572 VSGTLLILTFWP 583
           V    +I   WP
Sbjct: 434 VVAIAVIPMIWP 445



 Score = 82.4 bits (202), Expect = 4e-20
 Identities = 58/202 (28%), Positives = 108/202 (53%), Gaps = 7/202 (3%)

Query: 7   LAFTILVATILMFALDKLRYDLVALLSLSAGVLAGL--VPPDKAFHGFSDPVVVVVAAAL 64
           +   IL    ++F  + L   + A+L   A    G+  +   +AF  F +  VV+  AA 
Sbjct: 38  ITLIILGTAAVLFFTEALPLPVTAMLVPVALSFPGIDILSSSRAFADFGNKWVVLFMAAF 97

Query: 65  VVSAGIERSGIIERL--MKPLSALKSPDALIGTLVALVMVLSAFMKNIGALAIFIPLSVR 122
           ++   + R+G  +++  +   +A KS   L+  ++  +  +SAF+ N G  A FIP+ + 
Sbjct: 98  ILGEAVFRTGFADKIGQLTVKAAGKSQLKLMLLVMLAIGTMSAFLSNTGTTAAFIPIVMG 157

Query: 123 LARAGGIPVSQILMPLSFASLLGGVMTLIGTSPNIIVSRVRLELTGKA-FTMFDFTPVGV 181
           +  +  +   ++L+P+++A+ LGG +TLIGT PN +V+   LE +G A F  F+F  +G+
Sbjct: 158 ICVSASLKPGKLLIPMAYAASLGGTLTLIGTPPNGLVNDA-LEKSGIAPFGFFEFAKIGI 216

Query: 182 GICLAGIGFL-TFAWRVLPRDR 202
            I + GI +  T   ++LP  +
Sbjct: 217 LIFIVGILYYGTIGHKLLPESK 238



 Score = 50.4 bits (119), Expect = 1e-10
 Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 2/159 (1%)

Query: 2   TFEQGLAFTILVATILMFALDKLRYDLVALLSLSAGVLAGLVPPDKAFHGFSDPVVVVVA 61
           T +  +A  +    +LM A   +      +L     V+ G +   +AF+  S   + + A
Sbjct: 253 TNKMWIATLVFTFVVLMTATGTIPLVTAFMLGACMVVMTGCITMQEAFNSISWTTIFLFA 312

Query: 62  AALVVSAGIERSGIIERLMKP-LSALKSPDALIGTLVALVMVLSAFMKNIGALAIFIPLS 120
             L + + +  +G    +    ++ + SP AL+     L  +++  M N    A+ +PL 
Sbjct: 313 GMLPLGSAMAATGAATMIANTVITYVHSPLALLAAAYILTALITEVMSNTATAALVMPLG 372

Query: 121 VRLARAGGIPVSQILMPLSFASLLGGVMTLIGTSPNIIV 159
           + LA A  +    ILM ++ A+     +T I T PN+I+
Sbjct: 373 IALADAFDVSAKPILMAIAVAA-SSCFLTPIATPPNMII 410