Pairwise Alignments

Query, 386 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

Subject, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

 Score =  103 bits (258), Expect = 1e-26
 Identities = 109/380 (28%), Positives = 171/380 (45%), Gaps = 31/380 (8%)

Query: 19  RRQSDIEAVLRRTEAKFSTVFRACPDLIAITARSSGRFIEVNDAFERIMGWSKSEVIGRT 78
           R ++ +E  L    A   +   A PDLI     + G F   N A E + G  +SE++G T
Sbjct: 143 REKTQVE--LAERTALLRSFIDASPDLIYYR-NAKGEFSGCNRAMEELTGKRESELVGLT 199

Query: 79  SADL---ETWESRDERDRMLAALGESSRLENF-EVRFRRKSGEVFTALISLEATDLSGEP 134
             D+   E  +S  E D+ +     +   E + E    RKS   F  L  +   +  G  
Sbjct: 200 PWDVYRKEIAQSIVETDQQVFNNNTAITYEQWLEYPDGRKS---FFELRKVPFYNKDGRH 256

Query: 135 -SLIFVARDISERKAEEMVLRRTAEELERSNMELERFAYVAAHDLLEPCRTICSFAQMLD 193
             L+   RDI+ERK  E       E LE+++ +   F    +H+L  P   I   ++ML 
Sbjct: 257 LGLVGFGRDITERKRHE-------ESLEKASRDKTTFISTISHELRTPLNGIVGLSRML- 308

Query: 194 RKYADILDDEGREYLDFLVGGALRMRELIQGVLGYSRAGVAAAQMVEVDLGRAAAEVVSD 253
                 L  E R++L  +   A+ +  +   ++   +      ++    L         +
Sbjct: 309 --LDTPLSGEQRKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFEEFVAEIE 366

Query: 254 LGSALQARGGGVE-----VGPLP-VVRGDPAQLRQLLGNLIGNGVKFHAEG-TSPRVRVF 306
           + +AL A   G+      +  LP +V  D  +LRQ+L NL+ N +KF  EG     V   
Sbjct: 367 VLAALMAEQKGLRFDLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKFTKEGGVVMTVSAE 426

Query: 307 CGNRDGEWCVTVEDNGIGIAPEYQDDIFGIFRRLH-GPDRYS--GTGIGLAVARRIVDAH 363
           C  +  E  + VED GIGI    Q+ IF ++ ++  G D     GTGIGLAV+R+++   
Sbjct: 427 CDAQHAEITIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLM 486

Query: 364 GGRIWVESEPGWGARFRFTL 383
           GG I V SE G+G+ F  T+
Sbjct: 487 GGDISVNSEEGFGSTFTVTI 506