Pairwise Alignments

Query, 386 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  108 bits (270), Expect = 9e-28
 Identities = 96/351 (27%), Positives = 167/351 (47%), Gaps = 29/351 (8%)

Query: 52  SSGRFIEVNDAFERIMGWSKSEVIGRTSADLETWESRDERDRMLAALGESSRLENFEVRF 111
           + G+F+ VN  F  +MG   +EVI +   ++   E  +        L +    +N+EV  
Sbjct: 490 ADGKFLTVNAKFLDLMGLYNNEVIDKEPQEIFPAEVAERFAAAHQVLTQQQSSQNYEVSL 549

Query: 112 RRKSGE-----VFTALISLEATDLSGEPSLIFVARDISERKAEEMVLRRTAEELERSNME 166
              +G      V+ A  S  A  ++G   ++ +  D++ERK  E  LR+  E  +  +  
Sbjct: 550 VDYTGVQREMLVYEASFSDRADKVNG---IVGILLDMTERKEMEDELRKAKEAADAMSQA 606

Query: 167 LERFAYVAAHDLLEPCRTICSFAQMLDRKYADILDDEGREYLDFLVGGALRMRELIQGVL 226
              F    +H++  P   I   A +        LD   R+Y+  +   A  +  +I  +L
Sbjct: 607 KGDFLANMSHEIRTPMNAILGMAHLA---LNTPLDTTQRKYVTRINESAKNLLGIINDIL 663

Query: 227 GYSR--AGVAAAQMVEVDLGRAAAEVVSDLGSALQARGGGVEVG-------PLPVVRGDP 277
            +S+  AG    + ++ +L      V + +  +L+A+  G+E         PL ++ GDP
Sbjct: 664 DFSKMEAGKLNVERIDFNLDDVLDNVTAVV--SLKAQEKGIEFLMDIDPHIPLGLI-GDP 720

Query: 278 AQLRQLLGNLIGNGVKFHAEGT---SPRVRVFCGNRDGEWCVTVEDNGIGIAPEYQDDIF 334
            +L Q++ NL GN VKF ++G    S RV      +       V+D GIGIA +  DD+F
Sbjct: 721 LRLGQVMVNLCGNAVKFTSQGEIVLSARVSQL-NEQQVTLRFAVKDTGIGIAQDKLDDLF 779

Query: 335 GIFRRLHGP--DRYSGTGIGLAVARRIVDAHGGRIWVESEPGWGARFRFTL 383
             F +       +Y GTG+GL++++++V+  GG+I V SE G G+ F F++
Sbjct: 780 DAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSV 830