Pairwise Alignments

Query, 386 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

Subject, 1236 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  106 bits (265), Expect = 3e-27
 Identities = 100/383 (26%), Positives = 181/383 (47%), Gaps = 26/383 (6%)

Query: 20  RQSDIEAVLRRTEAKFSTVFRACPDLIAITARSSGRFIEVNDAFERIMGWSKSEVIGRTS 79
           R+ +    LR +E ++     A  D +      S   I  N ++  ++G+  +E     S
Sbjct: 570 REYESAEQLRLSEERYHLAMDAVEDGLWDWYLDSEHII-CNPSYYSMLGYKPNEFPALVS 628

Query: 80  ADLETWESRDERDRMLAALGE--SSRLENFEVRFR--RKSGEVFTALISLEATDLS--GE 133
           A ++     D+R R+     +   + ++ +E+ FR   K+G     L      + +  G+
Sbjct: 629 A-IDQLTHPDDRIRVEEYRNQYLENPVDAYEIEFRILGKNGSYHWVLSRGRVVEFTADGQ 687

Query: 134 PS-LIFVARDISERKAEEMVLRRTAEELERSNMELERFAYVAAHDLLEPCRTICSFAQML 192
           P  ++   +DI+  K+ E+ L    ++ E +N+    F    +H++  P   I    Q+ 
Sbjct: 688 PKRMVGTHKDITRHKSNEVALLEAKQDAELANLYKSEFLANMSHEIRTPMNAIIGMLQLA 747

Query: 193 DRKYADILDDEGREYLDFLVGGALRMRELIQGVLGYSR--AGVAAAQMVEVDLGRAAAEV 250
            R     L  + ++YL+     A  +  +I  +L +S+  AG    + V   L +     
Sbjct: 748 QRTS---LTAQQKDYLEKAGFSAQSLLRIINDILDFSKIEAGKLELERVPFPLDKVLDHA 804

Query: 251 VSDLGSALQARGGGVEV---GPLP---VVRGDPAQLRQLLGNLIGNGVKFHAEGTSPRVR 304
           + DL +AL+A+  GVE+    P+    +++GDP +L Q+L NL+ N VKF   G      
Sbjct: 805 L-DL-NALKAQEQGVELLLYAPVTAGLILKGDPLRLGQVLINLLSNAVKFTQSGEIELGC 862

Query: 305 VFCGNRDGEWCVT--VEDNGIGIAPEYQDDIFGIFRRLHGPD--RYSGTGIGLAVARRIV 360
              G RD    +   V D GIGI+ + Q+ +F  F +  G    +Y GTG+GL++++ +V
Sbjct: 863 EDVGERDHRITLKFWVRDTGIGISKDQQEKLFDAFAQADGSTTRKYGGTGLGLSISKHLV 922

Query: 361 DAHGGRIWVESEPGWGARFRFTL 383
              GG++ V+SE G G+ F FT+
Sbjct: 923 SMMGGKMQVQSELGVGSTFSFTI 945



 Score = 35.8 bits (81), Expect = 7e-06
 Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 18/121 (14%)

Query: 17  RDRRQSDIEAVLRRTEAKFSTVFRACPDLIAITARSSGRFIEVNDAFERIMGWSKSEVIG 76
           R  R  D      R  A   ++  + P+ I    +  G ++  N A ER++G+++SE+IG
Sbjct: 442 RTERLKDATERREREYALLRSLLDSIPEAIVFKDKE-GNYLGCNKAAERMLGYTESEMIG 500

Query: 77  RTSADLETWESRDERDRMLAALGESSRLENFEVRFRRKSGEVFTALISLEATDLSGEPSL 136
            +S DL + E           +G   R E+ ++   R      T L   E  +L+G+P L
Sbjct: 501 LSSEDLTSPE-----------MGIRIRAEDEQILKDR------TPLRYQEKVELAGKPVL 543

Query: 137 I 137
           +
Sbjct: 544 L 544