Pairwise Alignments

Query, 764 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Magnetospirillum magneticum AMB-1

Subject, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

 Score =  304 bits (778), Expect = 1e-86
 Identities = 180/411 (43%), Positives = 254/411 (61%), Gaps = 22/411 (5%)

Query: 13  ALSHATERRHEYATLEHLLLALTDDQDAVA--VLRACNVDVDKLKRDLGEFIDTNLSELV 70
           A S A  R H+Y    HL++AL D   +    +L   NVDV +L+  LGE +D      V
Sbjct: 17  AQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQLRSKLGEMLDR--LPKV 74

Query: 71  SPRGTDPKPTAGFQRVVQRAAIHVQSSGREEVTGANVIVALFSERESHAVYFLQSQDMTR 130
           S  G D + ++    +       V    ++    + + +    E +    + L+   +T 
Sbjct: 75  SGIGGDVQLSSALGSLFNLCD-KVAQKRQDAYISSEIYLLAAIEDKGPLGHLLKEFGLTE 133

Query: 131 LDAVNYISHGVAKAPGRGQNRTVHGADDEANPDKVVKKGQEALNAYCINLNKKAAQGKID 190
                 +S  + K  G GQ      A++           ++AL  + I+L ++A QGK+D
Sbjct: 134 ----KKVSEAIEKIRG-GQKVNDPNAEEL----------RQALEKFTIDLTERAEQGKLD 178

Query: 191 PLIGRDEEIDRTIQILCRRSKNNPLYVGDPGVGKTAIAEGLARRIVNGEVPDVLKNATIF 250
           P+IGRD+EI RTIQ+L RR+KNNP+ +G+PGVGKTAI EGLA+RI+N EVP+ L+   + 
Sbjct: 179 PVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVL 238

Query: 251 ALDMGSLLAGTRYRGDFEERLKAVVTELENYDG-AVMFIDEIHTVIGAGATSGGSMDASN 309
           +LDMG+L+AG +YRG+FEERLK+V+ EL   +G  ++FIDE+HT++GAG    GSMDA N
Sbjct: 239 SLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAG-KGEGSMDAGN 297

Query: 310 LLKPALASGSLRCIGSTTYKEFRNHFEKDRALVRRFQKIDVNEPSIPDTIKILNGIKTYY 369
           +LKPALA G L C+G+TT  E+R + EKD AL RRFQK+ V+EP++ DTI IL G+K  Y
Sbjct: 298 MLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERY 357

Query: 370 ESHHKVRYTAEAIKAAVELSAKYITDRKLPDKAIDVIDEVGASRMLLPESK 420
           E HH V  T  AI AA  LS +YI+DR+LPDKAID+IDE  +S  +  +SK
Sbjct: 358 ELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSK 408



 Score =  278 bits (711), Expect = 9e-79
 Identities = 145/349 (41%), Positives = 225/349 (64%), Gaps = 8/349 (2%)

Query: 400 DKAIDVIDEVGASRMLLPESKRRKTVTVRDVEEIVAKIARIPPKSVSTNDVEALRNLERD 459
           +K +D+  +     M L  +K    VT  ++ E+++K   IP   +   + E L  +E  
Sbjct: 510 EKQLDLAAQAEMQEMTLLRNK----VTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDV 565

Query: 460 LKTLVFGQDKAIEALASAIKLARAGLREPEKPIGCYLFSGPTGVGKTEVARQLAKIMGIE 519
           L   V GQ +A+E +A+AI+ +RAGL +P +PIG +LF GPTGVGKTE+ + LA  +   
Sbjct: 566 LHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDS 625

Query: 520 ---LTRFDMSEYMERHSVSRLIGAPPGYVGFDQGGLLTDAIDQHPHSVLLLDEIEKAHPD 576
              + R DMSE+ME+HSV+RL+GAPPGYVG+++GG LT+A+ + P+SV+LLDE+EKAHPD
Sbjct: 626 EDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPD 685

Query: 577 LFNILLQVMDHGRLTDHNGKTVDFRNVILIMTTNAGAADLAKSAIGFGRETREGDDTDAI 636
           +FNILLQV+D GRLTD  G+TVDFRN ++IMT+N G++ + ++      +  +    D +
Sbjct: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLDYQGIKEQVMDVV 745

Query: 637 NRMFSPEFRNRLDSTIAFANLTPEIVAQVVDKFVMQLETQLGDRDVTIELTDEARAWLAK 696
           ++ F PEF NR+D ++ F  L  E +  +    + +L  +L +RD  +E+ DEA   +A 
Sbjct: 746 SKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAH 805

Query: 697 KGYDRSFGARPLARVIQEHIKKALAEELLFGRLSKGGIVRVRVGEDGKL 745
            G+D  +GARPL R IQ++++  LA+ +L G+   G  + + V +DG +
Sbjct: 806 VGFDPVYGARPLKRAIQQNVENPLAKSILAGKFLPGSPILLSV-KDGNI 853