Pairwise Alignments

Query, 764 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Magnetospirillum magneticum AMB-1

Subject, 883 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  300 bits (768), Expect = 2e-85
 Identities = 192/473 (40%), Positives = 279/473 (58%), Gaps = 51/473 (10%)

Query: 8   QSLHRALSHATERRHEYATLEHLLLALTDDQD-AVAVLRACNVDVDKLKRDLGEFIDTNL 66
           +++ R    A + +H+    EHL LAL  +   A+ +L+   ++  +L++    FI    
Sbjct: 24  EAIVRTTDVAKQAQHQQIESEHLFLALLQEPGLALNILKKAGLEAAQLQQFTERFI---- 79

Query: 67  SELVSPRGTDPKPTAGFQRV---------VQRAAIHVQSSGREEVTGANVIVALFSERES 117
                     PK + G Q V         + +A    +  G E ++  ++I++    R+S
Sbjct: 80  -------ARQPKVSGGNQSVYLGRSLDQLLDQADQFRKDFGDEFISVEHLILSF--PRDS 130

Query: 118 HAVYFLQSQDMTRLDAVNYISHGVAKAPGRGQNRTVHGADDEANPDKVVKKGQEALNAYC 177
                L  +       +  I   +     RG  +       + NP+       EAL  Y 
Sbjct: 131 RFGRLLSQEFKVDEKQLRQIIQQI-----RGSQKVT-----DQNPEGKY----EALEKYG 176

Query: 178 INLNKKAAQGKIDPLIGRDEEIDRTIQILCRRSKNNPLYVGDPGVGKTAIAEGLARRIVN 237
            +L + A +GK+DP+IGRD+EI RTIQIL RR+KNNP+ +G+PGVGKTAIAEGLA+RI+N
Sbjct: 177 RDLTEMARRGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIN 236

Query: 238 GEVPDVLKNATIFALDMGSLLAGTRYRGDFEERLKAVVTELENYDG-AVMFIDEIHTVIG 296
           G+VP  LK+  + ALDMG+L+AG ++RG+FEERLKAV+ E+ + +G  ++FIDEIHTV+G
Sbjct: 237 GDVPQSLKDRRLIALDMGALIAGAKFRGEFEERLKAVLKEVTDSEGIIILFIDEIHTVVG 296

Query: 297 AGATSGGSMDASNLLKPALASGSLRCIGSTTYKEFRNHFEKDRALVRRFQKIDVNEPSIP 356
           AGA   GSMDA NLLKP LA G LRCIG+TT  E+R + EKD AL RRFQ++ V++P++ 
Sbjct: 297 AGAVQ-GSMDAGNLLKPMLARGELRCIGATTLDEYRQYIEKDAALERRFQQVFVDQPTVE 355

Query: 357 DTIKILNGIKTYYESHHKVRYTAEAIKAAVELSAKYITDRKLPDKAIDVIDEVGASRMLL 416
           DTI IL G+K  YE HH VR +  A+ AA  LS +YI+DR LPDKAID++DE  A+R+  
Sbjct: 356 DTISILRGLKERYEVHHGVRISDNALVAAAVLSTRYISDRFLPDKAIDLVDE-SAARL-- 412

Query: 417 PESKRRKTVTVRDVEEIVAKIARIPPKSVSTN------DVEALRNLERDLKTL 463
              K   T    +++EI  KI ++  + +S          E L+ LE++L  L
Sbjct: 413 ---KMEITSKPEELDEIDRKILQLEMERLSLQKESDLASQERLQRLEKELADL 462



 Score =  291 bits (745), Expect = 1e-82
 Identities = 153/339 (45%), Positives = 233/339 (68%), Gaps = 5/339 (1%)

Query: 418 ESKRRKTVTVRDVEEIVAKIARIPPKSVSTNDVEALRNLERDLKTLVFGQDKAIEALASA 477
           +S  R+ VT  D+ EI++K   IP   +  ++++ L NL+ +L   V GQ++A+ A+A A
Sbjct: 539 KSLLREEVTEVDIAEIISKWTGIPVSKLVESEMQKLLNLDEELHQRVIGQEEAVSAVADA 598

Query: 478 IKLARAGLREPEKPIGCYLFSGPTGVGKTEVARQLAKIM---GIELTRFDMSEYMERHSV 534
           I+ +RAGL +P++PI  ++F GPTGVGKTE+A+ LA  +      + R DMSEYME+H+V
Sbjct: 599 IQRSRAGLSDPKRPIASFIFLGPTGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAV 658

Query: 535 SRLIGAPPGYVGFDQGGLLTDAIDQHPHSVLLLDEIEKAHPDLFNILLQVMDHGRLTDHN 594
           SRLIGAPPGYVG+D+GG LT+A+ + P+SV+L DEIEKAHPD+FN++LQ++D GR+TD  
Sbjct: 659 SRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSR 718

Query: 595 GKTVDFRNVILIMTTNAGAADLAKSAIGFGR-ETREGDDTDAINRMFSPEFRNRLDSTIA 653
           G+TVDF+N ILI+T+N G+  +   A    R E      T+A+   F PEF NR+D TI 
Sbjct: 719 GRTVDFKNTILILTSNIGSQYILDVAGDDSRYEEMRSRVTEALRANFRPEFLNRVDETII 778

Query: 654 FANLTPEIVAQVVDKFVMQLETQLGDRDVTIELTDEARAWLAKKGYDRSFGARPLARVIQ 713
           F +L  + + Q+V   + +LE +L DR +++ ++ EA  +L + G+D  +GARPL RVIQ
Sbjct: 779 FHSLRKDQLQQIVRIQLHRLEERLSDRKLSLSMSPEAIDFLVEIGFDPVYGARPLKRVIQ 838

Query: 714 EHIKKALAEELLFGRLSKGGIVRVRVGEDGKLAFEFLAS 752
             ++ A+A+ +L G+ S G  ++V V E+ +L F+ +A+
Sbjct: 839 RELETAIAKAILRGQFSDGDTIQVAV-ENERLVFKAIAT 876