Pairwise Alignments

Query, 764 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Magnetospirillum magneticum AMB-1

Subject, 752 a.a., ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) from Shewanella loihica PV-4

 Score =  871 bits (2251), Expect = 0.0
 Identities = 432/743 (58%), Positives = 570/743 (76%), Gaps = 7/743 (0%)

Query: 1   MLSRNLEQSLHRALSHATERRHEYATLEHLLLALTDDQDAVAVLRACNVDVDKLKRDLGE 60
           ML+++LE +L+ A   A + RHEY T+EHLLLAL D+  A   L AC  ++DKL+ ++  
Sbjct: 1   MLNKDLEVTLNLAFQQARDARHEYMTVEHLLLALIDNPAAQEALLACGANLDKLREEVSS 60

Query: 61  FIDTNLSELVSPRGT-DPKPTAGFQRVVQRAAIHVQSSGREEVTGANVIVALFSERESHA 119
           FI+     +  P    + +PT GFQRV+QRA  HVQSSGR EVTGANV+VA+FSE+ES A
Sbjct: 61  FIEQTTPIISDPNDDRETQPTLGFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120

Query: 120 VYFLQSQDMTRLDAVNYISHGVAKAPGRGQNRTVHGADDEANPDKVVKKGQEALNAYCIN 179
           VY L++ ++TRLD VNYISHGV++      +   +  + E   D    + +  L+ +  N
Sbjct: 121 VYLLRNGEITRLDVVNYISHGVSR------DELDNAQEPEQIEDHSESEERSKLSQFTAN 174

Query: 180 LNKKAAQGKIDPLIGRDEEIDRTIQILCRRSKNNPLYVGDPGVGKTAIAEGLARRIVNGE 239
           LN++A +G IDPLIGR +EI+R+IQILCRR KNNPL VG+ GVGKTAIAEGLA RIVN E
Sbjct: 175 LNEEARKGNIDPLIGRSDEIERSIQILCRRRKNNPLLVGEAGVGKTAIAEGLAYRIVNDE 234

Query: 240 VPDVLKNATIFALDMGSLLAGTRYRGDFEERLKAVVTELENYDGAVMFIDEIHTVIGAGA 299
           VP+V+ +AT+++LD+G+LLAGT+YRGDFE+R K+++ EL     A++FIDEIHT+IGAGA
Sbjct: 235 VPEVMADATVYSLDLGALLAGTKYRGDFEKRFKSLLKELSQDKHAILFIDEIHTIIGAGA 294

Query: 300 TSGGSMDASNLLKPALASGSLRCIGSTTYKEFRNHFEKDRALVRRFQKIDVNEPSIPDTI 359
            SGG MDASNLLKP L+SG LRC+GSTT++E+++ FEKDRAL RRFQK+D+NEPS+ +T 
Sbjct: 295 ASGGVMDASNLLKPLLSSGHLRCMGSTTFQEYQSIFEKDRALARRFQKVDINEPSVAETT 354

Query: 360 KILNGIKTYYESHHKVRYTAEAIKAAVELSAKYITDRKLPDKAIDVIDEVGASRMLLPES 419
           KIL G+K+ YE HH VRYT  A+  A  L+ K+I DR LPDKAIDVIDE GA   + P S
Sbjct: 355 KILQGLKSKYEEHHGVRYTMAALSVAARLADKHINDRHLPDKAIDVIDEAGARMAMQPAS 414

Query: 420 KRRKTVTVRDVEEIVAKIARIPPKSVSTNDVEALRNLERDLKTLVFGQDKAIEALASAIK 479
           KR+KT+   ++E I+AKIARIP K+VS  D + L+NLER+LK +VFGQDKAIEAL+SAI+
Sbjct: 415 KRKKTIGQAEIESIIAKIARIPEKTVSATDKDMLKNLERNLKMVVFGQDKAIEALSSAIR 474

Query: 480 LARAGLREPEKPIGCYLFSGPTGVGKTEVARQLAKIMGIELTRFDMSEYMERHSVSRLIG 539
           L+R+GL    KP+G +LF+GPTGVGKTEV  QLA  + ++L RFDMSEYME H+VSRLIG
Sbjct: 475 LSRSGLSGAHKPVGSFLFAGPTGVGKTEVTSQLASCLSLKLVRFDMSEYMESHTVSRLIG 534

Query: 540 APPGYVGFDQGGLLTDAIDQHPHSVLLLDEIEKAHPDLFNILLQVMDHGRLTDHNGKTVD 599
           APPGYVG+DQGGLLTDA+ ++PH V+LLDEIEKAHPD++N+LLQVMDHG LTD+NG+  D
Sbjct: 535 APPGYVGYDQGGLLTDAVIKNPHCVVLLDEIEKAHPDVYNLLLQVMDHGTLTDNNGRKAD 594

Query: 600 FRNVILIMTTNAGAADLAKSAIGFGRETREGDDTDAINRMFSPEFRNRLDSTIAFANLTP 659
           FR+V L+MTTNAG  +  + +IGF ++    D    INR+FSPEFRNRLD  I F +L  
Sbjct: 595 FRHVTLVMTTNAGVQETVRKSIGFKQQDHSQDALSEINRVFSPEFRNRLDEIIWFNHLDM 654

Query: 660 EIVAQVVDKFVMQLETQLGDRDVTIELTDEARAWLAKKGYDRSFGARPLARVIQEHIKKA 719
            ++A+VVDKF+++L+ QL ++ V ++++D+AR  LA+KGYD++ GARP+ARV+ E IK+ 
Sbjct: 655 TVIAKVVDKFLVELQAQLDEKSVVLDVSDDARTLLAEKGYDKAMGARPMARVVTEMIKRP 714

Query: 720 LAEELLFGRLSKGGIVRVRVGED 742
           LA+E+LFG+L KGG+  V V  D
Sbjct: 715 LADEILFGKLEKGGVAHVDVDGD 737