Pairwise Alignments

Query, 687 a.a., hybrid sensor histidine kinase/response regulator from Magnetospirillum magneticum AMB-1

Subject, 1279 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  290 bits (741), Expect = 4e-82
 Identities = 241/720 (33%), Positives = 351/720 (48%), Gaps = 75/720 (10%)

Query: 8    LVAENALLRGEIRVAREAAEITARLVVKQFEETERLLDRFQSANAQRQAVLDAALQMSII 67
            + A+N  +R E    R+  E+   LV ++  E   L    + AN ++QAV DAA ++ II
Sbjct: 365  IAAQNETIRQE----RDHLEV---LVEERTAELVGLAKSLRDANQEQQAVFDAA-RIGII 416

Query: 68   ATDMNGKVLLFNRGAETLLGYASDEVVGQSTLLDFLLPEEVAAHADELAAELGHAVSPET 127
             T  +  +   NR  E +LGY   E++ QST + +  P+E    A             E 
Sbjct: 417  LT-RDRIIRRCNRTIEEILGYEPGEILEQSTRIWY--PDEATFLA-----------VGER 462

Query: 128  LFAEYVRHGLISAREWTYRRKDGTRF--PVSLSITPLKGGDGGLAGTLAAAMDITERKWA 185
            +     RHG     E    RKDG+RF   +   +      + G+AGT+    DI E +  
Sbjct: 463  VREGLTRHGYFR-EELELVRKDGSRFWGRIMAQVIDRNAPEKGMAGTVE---DIGEERRI 518

Query: 186  EEEAHRAKQAAEAANQAKSSFLANMSHELRTPLNAIIGYSEMLQEEMEDLGQDDLIPDLA 245
              E  +AK  AEAA QAK+ FLANMSHE+RTP+NA+IG + +  +   D  Q +    L 
Sbjct: 519  LAEMAQAKALAEAAAQAKADFLANMSHEIRTPMNAVIGMTHLALKTDLDERQREY---LR 575

Query: 246  KIHSAGRHLLTLINDVLDISKIEAGKMDLFVEAFEIAPMVADVVATISPLIQKNGNTLVV 305
            KI  + +HLL +IND+LD SK EAGK+ +    F++  ++ DV + +S      G   V+
Sbjct: 576  KIQHSSQHLLGIINDILDFSKSEAGKLHIEQIDFDLEKVLEDVSSLMSERATSKGLEFVI 635

Query: 306  DGAGEIGA-MEADLTKVRQTLFNLLSNASKFTSDGTITLST-----RRQGEWIEFAVADT 359
            + A E+   +  D  ++ Q L N  SNA KFT  G + +       + Q   + FAV DT
Sbjct: 636  EMADEVPRHLVGDPLRIGQVLINYASNAVKFTERGEVAIHVGLEEDQGQEVLLRFAVHDT 695

Query: 360  GIGMAPAELDRLFQAFSQADASTTRKFGGTGLGLAISRTFCRMMGGDIAVASEPGRGTT- 418
            GIG+   EL  LF +F QAD+STTRK+GGTGLGL I++    +MGG +   SEPGRG+T 
Sbjct: 696  GIGIKAGELPTLFNSFQQADSSTTRKYGGTGLGLVIAKRLAELMGGQVGAESEPGRGSTF 755

Query: 419  -FTVRLPAVSASPKAARPAGAIESGPELPLVLVIDDDAVARDLLGRFLDENGFRARFAAD 477
             FT RL   S +   A P   + +      +LV+DD   ARD++   L    F+      
Sbjct: 756  WFTARLGRSSNARHRAPPRPDLRT----RRLLVVDDHDHARDVVCDMLRSMSFQVSDTDS 811

Query: 478  GPLGL-EMARALRPA----AITLDVMMPGMDGWSVLTALKTDPELAAIP-VIMVSVVENQ 531
            G   L E+ RA         + LD  MP MDG +    ++   EL   P V+M++     
Sbjct: 812  GNRCLAELQRASAAGEPYDIVFLDWQMPEMDGLATAREIRR-LELPQPPLVLMITAYGRD 870

Query: 532  ALGYAL------GAHHFMSKPIDRDQLAEVLSRF--KEAGPIE----------------R 567
             L  +       G    + KP+   QL   + R    E GP                  R
Sbjct: 871  ELARSAGESGLQGIEEILIKPVSPSQLFNTVMRILDHEDGPHSAADPEALPDLAPLAGLR 930

Query: 568  ILVVEDDHTNREMLRRMLVKEGWSVIEAANGRIALERVAESRPDLILLDLMMPEMDGFEF 627
            +L+VED+  N+E+    L      V  A +G  ALE+V + R D+IL+D+ MP MDG   
Sbjct: 931  VLLVEDNQLNQEVASEFLAGANMVVDVADDGASALEKVRQQRYDVILMDMQMPVMDGIAA 990

Query: 628  VSELRRHSAWHAIPVVVLTAKDIGQDDRDRLAGGVQKVLQKGAADNETLLTELKRLVTPG 687
              E+RR      +P++ +TA  + QD    LA G+   + K   D   LL +L + + PG
Sbjct: 991  TREIRRQFPAAVLPILAMTANAMEQDRERCLAAGMNDHIAK-PVDPRDLLGKLLKWLAPG 1049