Pairwise Alignments

Query, 499 a.a., carbohydrate porin from Magnetospirillum magneticum AMB-1

Subject, 425 a.a., RpfN protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 84.0 bits (206), Expect = 1e-20
 Identities = 89/364 (24%), Positives = 143/364 (39%), Gaps = 19/364 (5%)

Query: 110 GGVSHGGKGQGRMQFDLDIDLEKMAELKGTTLHAGAMWIYGGRISGKNLGNLMPVSNIEA 169
           GG  +G    G++    D+DL  +    G T+ A     +G  +S  ++GN   V  I  
Sbjct: 51  GGRKNGDAYAGQLMVGTDVDLNSLFGWHGATVKAYVTNRHGTNLSNSSIGNSTSVQEIYG 110

Query: 170 IPSRRLFTLWGQQVLFDDMLSVRLGQLAVDDEFVVSKLSSVFV-NSTFGFPFGISGNLPS 228
               RL  L   Q LFDD L +  G+   +  F+ S L   F  NS  G P  +     S
Sbjct: 111 GQGTRLANLTLVQKLFDDRLELEAGRSVANIHFLGSDLCQYFQGNSACGNPTFVFRT--S 168

Query: 229 GGAAFPMPTPGARVKLNLTDEVSWMTAAFAGDPAGKFDVRDPQWRNHDGTTFSFSRGTFY 288
               +P+ +  A     +T +V     A+  +P    D          G  +S    T  
Sbjct: 169 NFTYWPVSSWAAHATAWVTPKVYVHVGAYEVNPVQAQD-------GQHGLKWSTDDTTGV 221

Query: 289 ITEGAYAVNQEKNSKGLPGTYKLGAWYHSARFNDQHFDNLGQSLASGNTTGIG-NPVRGN 347
           +   A     +     +   Y+LG W  ++ + D   D  G        +G+G    +G 
Sbjct: 222 VVPYAIGYKNKGGDGSMAAMYELGGWQDNSDYTDPLRDRNGNPAV---LSGLGYENKQGR 278

Query: 348 GGVYFVIDQMLIKGQRWSEEGLGVFLRGGVSPSDRNQV--PFYLDGGISYKGLFAGREED 405
            G++   +Q +         GL VF  G +  S   Q     ++  G+  KG FA R +D
Sbjct: 279 SGMFARFEQQVTNPDPSGARGLTVF--GAILKSTGGQAIEDHFVQLGLVQKGTFASRPQD 336

Query: 406 TLALGVGYGQLSGSLQGLDRDTRQINGQPTRPVRDYETVIEVTYQAQITPWWTIQPDVQY 465
            +A  +   + S       R  R   G    P  D + ++E++Y  Q+T    I P++ Y
Sbjct: 337 NIAFVITQQKYSDEAIENLRLARASAGGTGTPA-DNQIMMELSYGIQVTKRLRIAPNLHY 395

Query: 466 VIHP 469
           VI+P
Sbjct: 396 VINP 399