Pairwise Alignments

Query, 509 a.a., diguanylate cyclase from Magnetospirillum magneticum AMB-1

Subject, 485 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  138 bits (348), Expect = 4e-37
 Identities = 78/188 (41%), Positives = 112/188 (59%), Gaps = 3/188 (1%)

Query: 168 LNLELTNTVAALAASNAELHAAREELEHLAQRDGLTGAWTRRRIEETAQQEMLRKARYGH 227
           L L L  T+  L  SN  L   + +LE +A  D LTGA  R+  EE   Q + +      
Sbjct: 295 LALSLVVTIGILFISNMTLGRYQRKLEIMASTDKLTGAANRQVFEEYFHQALDKAKLSQT 354

Query: 228 PVSLLFIDLDHFKRVNDTHGHAVGDDVLKAFCNIARKCMRSTDLLGRWGGEEFVILMPNS 287
            +S+L ID+DHFK+VND++GH+VGD VLK   N+ R  ++  D+L RWGGEEF++L+P  
Sbjct: 355 SISILLIDIDHFKKVNDSYGHSVGDLVLKTVTNLLRSQLKPQDILCRWGGEEFLVLLPEM 414

Query: 288 GVMIASLLAERIRKATMAFEFPIVG---RVTTSLGIAECREDETWDSWLARSDAALYAAK 344
            +  A+ LAER R +    E  + G    +T S+G+AE ++ E  +  + R+D ALY AK
Sbjct: 415 DLSRAAELAERFRDSISQRELKVNGVHIAITVSIGVAEYQKLEPAEDLIKRADLALYQAK 474

Query: 345 AGGRNQVI 352
             GRNQV+
Sbjct: 475 EAGRNQVV 482