Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter permease from Magnetospirillum magneticum AMB-1

Subject, 426 a.a., TRAP transporter, DctM subunit from Pseudomonas stutzeri RCH2

 Score =  308 bits (790), Expect = 2e-88
 Identities = 154/423 (36%), Positives = 255/423 (60%), Gaps = 3/423 (0%)

Query: 1   MNSAVIFGLLIVLMLTGMPISISLGLTVLSFLFLFTQVPIESVALKLFTGIEKFEIMAIP 60
           M++ V+ G  IVL+L  +P++ SLGL  L   + +  +P+ +V +++  G+ KF ++AIP
Sbjct: 1   MDAVVLLGSFIVLILLRVPVAYSLGLATLVGAW-WIDIPLHAVMIQIAGGVNKFSLLAIP 59

Query: 61  FFILAGNFLTHGGVARRMINFATAMVGHWYGGLGLAGVMACALFAAVSGSSPATVVAIGS 120
           FF+LAG  +  GG+ARR++ FA  +VG   GGL L  + A   F A+SGSS A   ++GS
Sbjct: 60  FFVLAGAIMAEGGMARRLVAFAGVLVGFVRGGLSLVNITASTFFGAISGSSLADTASVGS 119

Query: 121 IILPAMVKQGFPNKFGAGVITTSGALGILIPPSLVMVMYAVATN--TSVGALFMAGVIPG 178
           +++P M K+G+P +F   V  +     +L PPS   V+Y++A     S+ ALF+AG+ PG
Sbjct: 120 VLIPEMEKKGYPREFSTAVTISGSVQALLTPPSHNSVIYSLAAGGTVSIAALFVAGIGPG 179

Query: 179 LVLATVLGAVTWYIAWKNDYPRLPPATWAQRFRAFREAIWGLALIVIVIGGIYTGVFTPT 238
           L+L+  +  +    A K +YP+       Q  +   EA+WGL  +VI++GGI +GVFT T
Sbjct: 180 LLLSATMATLCLLFARKRNYPKGEVVPLRQALKICVEALWGLMTMVIILGGILSGVFTAT 239

Query: 239 EAAAMSAVYAFLIAVFVYKDMPLKGVGKILLSSASMSAMLLYIITNAVLFSFVLANENIP 298
           E+AA++ V+AF + +F+Y+D     + ++L  +    ++++ +I  A  F +++    IP
Sbjct: 240 ESAAVAVVWAFFVTMFIYRDYKWSELPRMLHRTVRTLSIVMILIAFAASFGYIMTLMQIP 299

Query: 299 HAIADWIVGKELGVIAFLLVVNVLLLVAGNFMEPSSIVLIMAPILFPVAMKLGIDPIHFG 358
             I    +         L+ +N +LLV G  M+ + ++LI+ PIL PV +  G+DP+HFG
Sbjct: 300 SKITTAFLALSDNRYVILMCINFMLLVLGTLMDMAPLILILTPILLPVVVSFGVDPVHFG 359

Query: 359 ILIVVNMEVGMCHPPVGLNLYVASGITKMGITELTVAVWPWLLAMLGFLMVVTYWPPLSI 418
           ++++VN+ +G+  PPVG  L+V + I K+ I     A+ P+  A+   LM VTY P +S+
Sbjct: 360 MIMLVNLGIGLITPPVGAVLFVGAAIGKVTIENTVKALLPFYAALFAVLMAVTYIPMISL 419

Query: 419 WLP 421
           WLP
Sbjct: 420 WLP 422