Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter permease from Magnetospirillum magneticum AMB-1

Subject, 467 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, large permease component (from data) from Phaeobacter inhibens DSM 17395

 Score =  392 bits (1006), Expect = e-113
 Identities = 210/459 (45%), Positives = 297/459 (64%), Gaps = 35/459 (7%)

Query: 1   MNSAVIFGLLIVLMLTGMPISISLGLTVLSFLFLFTQVPIESVALKLFTGIE-KFEIMAI 59
           M+  ++F ++I L+L G+PI+++LGL+   FL +++   + SVA  LF   E  F ++AI
Sbjct: 1   MDVVLLFSMVIGLLLIGVPIAVALGLSSTLFLLIYSDSSLASVAGTLFEAFEGHFTLLAI 60

Query: 60  PFFILAGNFLTHGGVARRMINFATAMVGHWYGGLGLAGVMACALFAAVSGSSPATVVAIG 119
           PFFILA +F+T GGVARR+I F+ A VGH  GGL +AGV AC LFAA+SGSSPATVVAIG
Sbjct: 61  PFFILASSFMTTGGVARRIIRFSIACVGHLPGGLAIAGVFACMLFAALSGSSPATVVAIG 120

Query: 120 SIILPAMVKQGFPNKFGAGVITTSGALGILIPPSLVMVMYAVATNTSVGALFMAGVIPGL 179
           SI++  M + G+  +F AGVI  +G LGILIPPS+VMV+YA A   SVG +F+AGVIPGL
Sbjct: 121 SIVIAGMRQVGYSKEFAAGVICNAGTLGILIPPSIVMVVYAAAVEVSVGRMFLAGVIPGL 180

Query: 180 VLATVLGAVTWYIAWKNDYPRLPPATWAQRFRAFREAIWGLALIVIVIGGIYTGVFTPTE 239
           +   +L    + +A   + P+     W +   +   A  GL LI I++GGIY G+FTPTE
Sbjct: 181 MAGLMLMVTIYVMAKVKNLPKGEWLGWGEVAASAANASVGLLLIGIILGGIYGGIFTPTE 240

Query: 240 AAAMSAVYAFLIAVFVYKDM-PLKGVGK-------------------------------- 266
           AAA+++VYAF +A FVY+DM PLK   K                                
Sbjct: 241 AAAVASVYAFFVATFVYRDMGPLKSAPKPKDMGQFLTMLPKMLGQTVVYFIPSFFHADTR 300

Query: 267 -ILLSSASMSAMLLYIITNAVLFSFVLANENIPHAIADWIVGKELGVIAFLLVVNVLLLV 325
             L  +  ++  LL++I NA++   VL +E +P  IA  ++    G + FL+VVNV+LL+
Sbjct: 301 HALFEAGKLTVTLLFVIANALILKHVLTDEQVPQQIATAMLSAGFGPVMFLIVVNVILLI 360

Query: 326 AGNFMEPSSIVLIMAPILFPVAMKLGIDPIHFGILIVVNMEVGMCHPPVGLNLYVASGIT 385
            G FMEPS +++I+AP++FP+A++LGIDPIH GI++VVNME+GM  PPVGLNL+V SG+ 
Sbjct: 361 GGQFMEPSGLLVIVAPLVFPIAIELGIDPIHLGIIMVVNMEIGMITPPVGLNLFVTSGVA 420

Query: 386 KMGITELTVAVWPWLLAMLGFLMVVTYWPPLSIWLPRAL 424
            M +  +  A  P+L  +  FL+++TY P +S  LP A+
Sbjct: 421 GMPMMAVVRAALPFLAVLFVFLIMITYIPWISTVLPNAV 459