Pairwise Alignments

Query, 687 a.a., C4-dicarboxylate ABC transporter from Magnetospirillum magneticum AMB-1

Subject, 675 a.a., TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

 Score =  791 bits (2043), Expect = 0.0
 Identities = 394/652 (60%), Positives = 496/652 (76%), Gaps = 1/652 (0%)

Query: 30  IFWIAIAFSVFQIVTAAYSPLSSLPVRSIHVGFLLLMVFALYAAMGRGNPVKVATAWALG 89
           +F++A+ FS+FQIVTAA+SP+SS+ +R++HVGFLL +VF  Y A GR  P +   AW L 
Sbjct: 19  LFYVALLFSIFQIVTAAFSPVSSIVLRAVHVGFLLWVVFLSYPAHGRQRPWQ-PLAWVLS 77

Query: 90  GLSFILSLYHLIYEGELVQRSGDPSTTDLVVGTVMVALVFEAARRLMGWALPALCLVFVA 149
                 +LY  ++E +L+QRSGD +TTD+++G V+V LVFEAARR+MG ALP +C +F+A
Sbjct: 78  LGGVATALYQWVFESDLIQRSGDLTTTDMIMGIVLVVLVFEAARRVMGIALPIICGLFLA 137

Query: 150 YAAFGEILPAPLGHRGYGFDQIINQYFLGTEGIFGIPCYVSATYIFLFILFGSFLEQAGM 209
           Y  FGE LP  L HRGYG DQIINQ   GTEG++G P YVSATYIFLFILFG+FLE+AGM
Sbjct: 138 YGLFGEYLPGDLAHRGYGLDQIINQLSFGTEGLYGTPTYVSATYIFLFILFGAFLEKAGM 197

Query: 210 IRLFTDVALGTVGHTKGGPAKVAVVTSGLMGTINGSGIANVVTTGALTIPLMKRFGYRSE 269
           I+LFTD A+G  GH  GGPAKVAVV+S LMGTI GSGIANVVTTG  TIPLMKRFGY++ 
Sbjct: 198 IKLFTDFAMGLFGHKLGGPAKVAVVSSALMGTITGSGIANVVTTGQFTIPLMKRFGYKAA 257

Query: 270 FAGAVEATASMGGQIMPPVMGAVAFIMAETLNISYAEVCKAAAIPALLYYASAIWMVHLE 329
           FAG VEAT+SMG QIMPPVMGAVAFIMAET+N+ + E+ KAA IPA LY+ S  WMVHLE
Sbjct: 258 FAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPACLYFGSVFWMVHLE 317

Query: 330 AGIAGLHGMPKDQCPSAQGALRRQWYLMVPLAALVYLLLAGFTPMFSGTVGLALTAIVIL 389
           A  + L G+PKDQCPSA GA++  W+L++PL  LVYLL +G TP+FSG VGLALTAIVIL
Sbjct: 318 AKRSDLKGLPKDQCPSAWGAVKDSWFLLIPLGVLVYLLFSGRTPLFSGMVGLALTAIVIL 377

Query: 390 GSSIAANIGGMAGRVVFWGVLGIASSAFFKLGINVVVVTVAVLVGVNFFVRGGRETMRMT 449
           GS+I   +   A R  FW  LG+    FF+LGI VV   + VLV   +F++G RET+ + 
Sbjct: 378 GSAIILKVSNYALRCAFWIALGLLCVGFFRLGIGVVFAVIGVLVVACWFMQGTRETLVIC 437

Query: 450 VRGLVEGARSAVPVGVACTLVGTIIGTMTLTGIAGSFTQGLVSMSGGSLFLTLILTMIAS 509
           +  LV+GAR AVPVG+AC LVG+II  ++LTG+A +F   ++++   +L L+LILTM+  
Sbjct: 438 LHALVDGARHAVPVGIACALVGSIIAVVSLTGVASTFAGYILAIGRDNLLLSLILTMLTC 497

Query: 510 LILGMGIPTIPTYIITSSLVAPMLFKMGVPLVVSHMYVFYFGILADLTPPVGLAAFAAAS 569
           L+LGMGIPTIP YIITSS+ AP L ++GVPL+VSHM+VFYFGILADLTPPV LA FAAA 
Sbjct: 498 LVLGMGIPTIPNYIITSSIAAPALLELGVPLIVSHMFVFYFGILADLTPPVALACFAAAP 557

Query: 570 IARSNFFVTGWWAVRVAMAGFVVPFMAVYDPSLMMVSGSLFDTAYVVIKALLAIGLWGAA 629
           IAR +     +WAVR+A+AGFV+PFM VY+P+LM+   +L+ TAY++IK LLA+GLWG A
Sbjct: 558 IARESGLKISFWAVRIALAGFVIPFMTVYNPALMLQGDNLWMTAYMLIKTLLAVGLWGMA 617

Query: 630 TIGYLWAPMKMWERAVAVLAAFLLVAAVPLTDEIGFALSAVFLAWHWMRARR 681
           + GYL   M +WER +   A  LLV A+P+TDEIGF L  + +  H  RARR
Sbjct: 618 STGYLQQKMPIWERLLCFAAGALLVVALPVTDEIGFVLGGLLILQHVWRARR 669