Pairwise Alignments

Query, 687 a.a., C4-dicarboxylate ABC transporter from Magnetospirillum magneticum AMB-1

Subject, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  370 bits (949), Expect = e-106
 Identities = 250/706 (35%), Positives = 382/706 (54%), Gaps = 61/706 (8%)

Query: 4   QDEKDVDLAEIDTKGEVFGHGVESRGIFWIAIAFSVFQIVTAAYSP-------LSSLPVR 56
           QD +++ +A+ DT G     G+  R ++++ + +S+FQ+  A+  P       L+    R
Sbjct: 9   QDVQEM-VAQADT-GARAPKGLPGRVLWFVPLCWSLFQLWYASPLPFIFDFGVLNDTQAR 66

Query: 57  SIHVGFLLLMVFALYAAMGRGNPVK--VATAWALGGLSFILSLYHLIYEGELVQRSGDPS 114
           SIH+ F + + F  Y AM +G+P      T W L       + Y  ++  EL  RSG P+
Sbjct: 67  SIHLTFAVFLAFTAYPAM-KGSPRDRIPLTDWLLALAGSFSAAYIYLFYAELAGRSGAPT 125

Query: 115 TTDLVVGTVMVALVFEAARRLMGWALPALCLVFVAYAAFGEILPAPLGHRGYGFDQIINQ 174
             D++   V + L+ EA RR +G  L  +  +F+ Y   G  +P  + H+G   ++ ++ 
Sbjct: 126 QFDVIASVVGMVLLLEATRRALGPPLMMVAALFLLYTFAGPYMPDVIAHKGASLNKAMSH 185

Query: 175 YFLGTEGIFGIPCYVSATYIFLFILFGSFLEQAGMIRLFTDVALGTVGHTKGGPAKVAVV 234
            +L TEG+FG+   VS +++FLF+LFG+ LE+AG    F  VA   +GH +GGPAK AVV
Sbjct: 186 LWLTTEGVFGVALGVSTSFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVV 245

Query: 235 TSGLMGTINGSGIANVVTTGALTIPLMKRFGYRSEFAGAVEATASMGGQIMPPVMGAVAF 294
            SGL G ++GS IANVVTTG  TIPLMKR G+    AGAVE  AS  GQ+ PP+MGA AF
Sbjct: 246 ASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAF 305

Query: 295 IMAETLNISYAEVCKAAAIPALLYYASAIWMVHLEAGIAGLHGMP-KDQCPSAQGALRRQ 353
           +M E + ISY EV KAA +PAL+ Y + I++VHLEA  AG+ G+P + Q   AQ  L   
Sbjct: 306 LMVEYVGISYVEVIKAAILPALISYIALIYIVHLEACKAGMSGLPRRHQSTVAQKLLSFT 365

Query: 354 WYL--MVPLAALVYLLLA--------GFTPMFSGTVGLALTAIVILGSSIAANIGGMAGR 403
             +  +  ++A+VY  +           TP+ +  +  A   +V + +  A    G+   
Sbjct: 366 ATILGLCVISAVVYYGIGWTKEAFGDAATPILTVVLLAAYVGLVKISAPYAKEGLGIDEN 425

Query: 404 VVFWGVLG--IASSAFFKLGINVVVVTVAV------------LVGVNFFVRGGRETMRMT 449
           + +   +   + S   + L I V+V  + V             V + F +   R  M + 
Sbjct: 426 LQYVPDVAPTLKSGLHYLLPIVVLVWCLTVERFSPGLSAFWASVFMIFILLTQRPLMALF 485

Query: 450 VR--GLVEGARSAVP-------------VGV--ACTLVGTIIGTMTLTGIAGSFTQGLVS 492
            R   L + A+  V              +G+  A    GT++G +TLTGI    T  +  
Sbjct: 486 NRTGSLGDAAKEGVTDLLESLVSGARNMIGIGVATAAAGTVVGVVTLTGIGLVMTDFVEF 545

Query: 493 MSGGSLFLTLILTMIASLILGMGIPTIPTYIITSSLVAPMLFKMG------VPLVVSHMY 546
           +SGG+L L LI T + SLILGMG+PT   YI+ S+L+AP++  +G      +PL+  H++
Sbjct: 546 ISGGNLMLMLIFTAVISLILGMGLPTTANYIVVSTLMAPVIVTLGAEHGLIIPLIAVHLF 605

Query: 547 VFYFGILADLTPPVGLAAFAAASIARSNFFVTGWWAVRVAMAGFVVPFMAVYDPSLMMVS 606
           VFYFGILAD TPPVGLAAFAAA+IA+S+   TG       +   ++PFM V++  L+++ 
Sbjct: 606 VFYFGILADDTPPVGLAAFAAAAIAKSDPIRTGIQGFAYDIRTAILPFMFVFNTQLLLMG 665

Query: 607 -GSLFDTAYVVIKALLAIGLWGAATIGYLWAPMKMWERAVAVLAAF 651
             S +     ++ ++ A+ L+ AAT G+     K WE    ++  F
Sbjct: 666 IDSWWHLMLTILSSITAMLLFSAATQGWWLTKTKWWEVVALLVLTF 711