Pairwise Alignments
Query, 687 a.a., C4-dicarboxylate ABC transporter from Magnetospirillum magneticum AMB-1
Subject, 425 a.a., dedA-like protein from Sinorhizobium meliloti 1021
Score = 87.8 bits (216), Expect = 9e-22
Identities = 90/417 (21%), Positives = 159/417 (38%), Gaps = 67/417 (16%)
Query: 197 FILFGSFLEQAGMIRLFTDVALGTVGHTKGGPAKVAVVTSGLMGTINGSGIANVVTTGAL 256
FIL G + G+ R D A+ VGH +GG VA++ + +M +I+GS A+ A+
Sbjct: 62 FILAGELMNAGGLSRRIIDFAIACVGHIRGGLGIVAIMAAVIMASISGSAAADTAALAAI 121
Query: 257 TIPLMKRFGYRSEFAGAVEATASMGGQIMPPVMGAVAFIMAETLNISYAEVCKAAAIPAL 316
IP+M + GY + + A + ++PP M + F +A N+S ++ A +P L
Sbjct: 122 LIPMMAKAGYNVPRSAGLIAAGGVIAPVIPPSMAFIVFGVA--ANVSITQLFMAGIVPGL 179
Query: 317 LYYASAIWMVHLEAGIAGLHGMPKDQCPSAQGAL-RRQWYLMVPLAALVYLLLAGFTPMF 375
+ + + L + +P+ GA R W L +P
Sbjct: 180 IMGIALVATWLLVVRKDDIQPLPRTPMKERVGATGRALWALGMP---------------- 223
Query: 376 SGTVGLALTAIVILGSSIAANIGGMAGRVVFWGVLGIASSAFFKLGINVVVVTVAVLVGV 435
++ILG GI + VV A+ VG+
Sbjct: 224 ----------VIILG--------------------GIKAGVVTPTEAAVVAAVYALFVGM 253
Query: 436 NFFVRGGRETMRMTVRGLVEGARSAVPVGVACTLVGTIIGTMTLTGIAGSFTQGLVSMSG 495
+ RE + G++ A V + + + S G +S
Sbjct: 254 VIY----RELKPRDLPGVILQAAKTTAVIMFLVCAALVSSWLITAANIPSEITGFISPLI 309
Query: 496 GSLFLTLILTMIASLILGMGIPTIPTYIITSSLVAPMLFKMGVPLVVSHMYVFYFGIL-- 553
L + + M+ L++G + PT +I + ++ P++ + G+ V YFG+L
Sbjct: 310 DRPTLLMFVIMLVVLVVGTALDLTPTILILTPVLMPIIKQAGIDPV-------YFGVLFI 362
Query: 554 -----ADLTPPVGLAAFAAASIARSNFFVTGWWAVRVAMAGFVVPFMAVYDPSLMMV 605
LTPPVG+ + + R +A +V F+ V P +++V
Sbjct: 363 MNTCIGLLTPPVGVVLNVVSGVGRVPLGKVIVGVTPFLVAQILVLFLLVLFPDIVIV 419
Score = 29.6 bits (65), Expect = 3e-04
Identities = 75/343 (21%), Positives = 121/343 (35%), Gaps = 50/343 (14%)
Query: 233 VVTSGLMGTINGSGIANVVTTGA-----LTIPLMKRFGYRSEFAGAVEATASMGGQIMPP 287
VV MG N IA + GA L IP G G +
Sbjct: 29 VVLMWYMGMFNTQIIAQNMIAGADTFTLLAIPFFILAGELMNAGGLSRRIIDFAIACVGH 88
Query: 288 VMGAVAF--IMAETL--NISYAEVCKAAAIPALLY--YASAIWMVHLEAGIAGLHGMPKD 341
+ G + IMA + +IS + AA+ A+L A A + V AG+ G+
Sbjct: 89 IRGGLGIVAIMAAVIMASISGSAAADTAALAAILIPMMAKAGYNVPRSAGLIAAGGVIAP 148
Query: 342 QCPSAQGALRRQWYLMVPLAA---LVYLLLAGFTPMFSGTVGLALTAIVILGSSIAANIG 398
P + +++ +AA + L +AG P + L T ++++ +
Sbjct: 149 VIPPSMA------FIVFGVAANVSITQLFMAGIVPGLIMGIALVATWLLVVRKDDIQPLP 202
Query: 399 GMAGRVVFWGVLGIASSAFFKLGINVVVVTVAVLVGVNFFVRGGRETMRMTVRGLVEGAR 458
R +G A + LG+ V+++ GG + G+V
Sbjct: 203 ----RTPMKERVGATGRALWALGMPVIIL-------------GGIKA------GVVTPTE 239
Query: 459 SAVPVGVACTLVGTII-GTMTLTGIAGSFTQGLVSMSGGSLFLTLILTMIASLILGMGIP 517
+AV V VG +I + + G Q + +FL + + LI IP
Sbjct: 240 AAVVAAVYALFVGMVIYRELKPRDLPGVILQA-AKTTAVIMFLVCAALVSSWLITAANIP 298
Query: 518 TIPTYIITSSLVAPMLFKMGVPLVVSHMYVFYFGILADLTPPV 560
+ T I+ + P L + LVV G DLTP +
Sbjct: 299 SEITGFISPLIDRPTLLMFVIMLVV-----LVVGTALDLTPTI 336
Score = 26.2 bits (56), Expect = 0.003
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 39/205 (19%)
Query: 383 LTAIVILGSSIAANIGGM--AGRVVFWGVLGIASSAFFKLGI---NVVV-VTVAVLVGVN 436
+T +V + S + A G+ A ++F GV+ + F I N++ L+ +
Sbjct: 1 MTLVVFIVSLLGAMAIGVPVAFSLMFCGVVLMWYMGMFNTQIIAQNMIAGADTFTLLAIP 60
Query: 437 FFVRGGRETMRMTVRGLVEGARSAVPVGVACTLVGTIIGTMTLTGIAGSFTQGLVSMSGG 496
FF+ G M GL +R + +AC VG I G + + I + + S+SG
Sbjct: 61 FFILAGE---LMNAGGL---SRRIIDFAIAC--VGHIRGGLGIVAIMAAVI--MASISGS 110
Query: 497 SLFLTLILTMIASLILGMGIPTIPTYIITSSLVAPMLFKMGVPLVVSHMYVFYFGILADL 556
+ T L ++++ PM+ K G + S + G++A +
Sbjct: 111 AAADTAAL---------------------AAILIPMMAKAGYNVPRSAGLIAAGGVIAPV 149
Query: 557 TPP-VGLAAF-AAASIARSNFFVTG 579
PP + F AA+++ + F+ G
Sbjct: 150 IPPSMAFIVFGVAANVSITQLFMAG 174