Pairwise Alignments

Query, 687 a.a., C4-dicarboxylate ABC transporter from Magnetospirillum magneticum AMB-1

Subject, 869 a.a., TRAP transporter, 4TM/12TM fusion protein from Phaeobacter inhibens DSM 17395

 Score =  366 bits (939), Expect = e-105
 Identities = 239/690 (34%), Positives = 369/690 (53%), Gaps = 63/690 (9%)

Query: 25  VESRGIFW--IAIAFSVFQIVTAAYSPLSSLPV--------RSIHVGFLLLMVFALYAAM 74
           V S G+F   +A+ +SVFQ+V A  SP+S+L +        R IH+ F + + +A Y A+
Sbjct: 31  VGSVGLFLAIVAVIWSVFQVVLA--SPVSNLLLPGSVVNNSRQIHLAFAIFLAYAAYPAL 88

Query: 75  GRGNPVKVATA-WALGGLSFILSLYHLIYEGELVQRSGDPSTTDLVVGTVMVALVFEAAR 133
                 ++    W L  +    +LY  I+  ++V   G     D +   + + L+FE AR
Sbjct: 89  KSSPTDRIPVQDWILALIGTFTALYGYIFYEKIVNSGGKGDDIDTIFAAIGLVLLFEGAR 148

Query: 134 RLMGWALPALCLVFVAYAAFG--EILPAPLGHRGYGFDQIINQYFLGTEGIFGIPCYVSA 191
           R +G A+  +  VF+ Y  FG  E++P  +  +G   D+ + Q ++ +EG+FGI   VS 
Sbjct: 149 RALGPAMAIVASVFMLYVFFGSSELVPDVIRWKGASLDRAMEQMWITSEGVFGIALGVST 208

Query: 192 TYIFLFILFGSFLEQAGMIRLFTDVALGTVGHTKGGPAKVAVVTSGLMGTINGSGIANVV 251
            ++FLF+LFG+ L++AG    F  +A G +GH +GGPAK AVV S   G I+GS IANVV
Sbjct: 209 KFVFLFVLFGALLDKAGAGNYFIKMAFGALGHLRGGPAKAAVVGSAATGLISGSSIANVV 268

Query: 252 TTGALTIPLMKRFGYRSEFAGAVEATASMGGQIMPPVMGAVAFIMAETLNISYAEVCKAA 311
           TTG  TIPLMKR G+ SE AG+VE  +S+ GQIMPPVMGA AF+M E + ISY EV   A
Sbjct: 269 TTGTFTIPLMKRVGFSSEQAGSVEVASSVNGQIMPPVMGAAAFLMVEYVGISYVEVITHA 328

Query: 312 AIPALLYYASAIWMVHLEA--------------------GIA-----------GLHGMPK 340
            +PA + Y + +++VHLEA                    G+A           G+    K
Sbjct: 329 FLPAAISYIALVYIVHLEAVKRNMPTLGNRVVSMGRTIGGMAAFFAGFAALCYGIQYPIK 388

Query: 341 DQCPSAQGALRRQWYLMVPLAALVYL-LLAGFTPMFSGTVGLALTAIVILGSSIAANIGG 399
               +  GA      L+V  A L  L L AG   +       A   + ++G    A +  
Sbjct: 389 AITAAIPGASGLVLSLLVVAAYLGLLWLAAGTDDLVPDDPNAAEVELPVVGEIYKAGLHY 448

Query: 400 MAGRVVFWGVLGIAS-----SAFFKLGINVVVVTV-----AVLVGVNFFVRGGRETMRMT 449
           +   +V    L I       SAF+   +  V++       A+  G +       + +   
Sbjct: 449 LLPIIVLVYFLMIEQKSPGLSAFWATALLFVILLTQKPLKALFRGQSTLAHSFLDGVHDL 508

Query: 450 VRGLVEGARSAVPVGVACTLVGTIIGTMTLTGIAGSFTQGLVSMSGGSLFLTLILTMIAS 509
             GL++GAR+ + + +A    G I+GT+TLTG+    ++ +  MSGG+L L LI+  + S
Sbjct: 509 WNGLIDGARNMIGIALATATAGVIVGTVTLTGVGQVMSELVELMSGGNLILMLIMVGLLS 568

Query: 510 LILGMGIPTIPTYIITSSLVAPMLFKMG------VPLVVSHMYVFYFGILADLTPPVGLA 563
           L+LGMG+PT   YI+ SSL+A ++ ++G      VPL+  H++VFYFGI+AD+TPPVGLA
Sbjct: 569 LVLGMGLPTTANYIVVSSLMAGVVVELGAQSGLVVPLIAVHLFVFYFGIMADVTPPVGLA 628

Query: 564 AFAAASIARSNFFVTGWWAVRVAMAGFVVPFMAVYDPSLMMVSGSLFDTAYVVIKALLAI 623
           +FAAA+++  +   TG+ A   ++    +PF+ +++  L+++         V I A +AI
Sbjct: 629 SFAAAAVSGGDAIRTGFVAFFYSLRTVALPFVFIFNTDLLLIDVGWVQGILVAISATIAI 688

Query: 624 GLWGAATIGYLWAPMKMWERAVAVLAAFLL 653
             + A T+ Y     +++E  + VL AF L
Sbjct: 689 LAFTAGTMNYFITRNRIYESVLLVLVAFAL 718