Pairwise Alignments

Query, 312 a.a., C4-dicarboxylate ABC transporter from Magnetospirillum magneticum AMB-1

Subject, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  160 bits (404), Expect = 5e-44
 Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 7/318 (2%)

Query: 2   KRVVFGAVLATILAVPAFAADQFLNILTGGTSGVYYPLGNALSSIYGKALP--GARVTVQ 59
           K +  GA+ A ++     +A  F+ I TG  +GVYYP G A+  +  K       R +V+
Sbjct: 11  KIIKMGAIAAAVIGSGVASAQDFITIGTGSVTGVYYPTGGAICKLVNKDRKDHNIRCSVE 70

Query: 60  ATKASVENLNLLQMGRGELAFTLGDSLTQAWDGVEEAGYKAPLKKLRTMAAIYPNYIQIV 119
           +T  S+ N+N ++ G  +      D     ++G  E   + P KKLR + +++     I+
Sbjct: 71  STGGSIYNVNTIRSGELDFGIVQSDWQYHGYNGTSEFAEQGPYKKLRAVFSMHTEPFNII 130

Query: 120 ATADSGIKTLADLKGKRVSVGAPKSGTELNARAIFKAAGLAYSDMKV-QYLPFGESVELM 178
           A ADSGI+ + DL GKRV++G P SG     + +  A G      K+   L   E  + +
Sbjct: 131 ARADSGIENVKDLAGKRVNIGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSERSQAL 190

Query: 179 KNKQLDATLQSAGLGVSSLRDLATGDDIVIV-AISPEVIAKTGDSAYIA-SVVPANTYRG 236
            + ++DA +   G    ++++  T     +V A  PE+     ++ Y A SVVPA  Y G
Sbjct: 191 CDNKIDAFIYMVGHPNGAIKEATTSCAAKLVPATGPEIEKIVANNPYYAYSVVPAGMYSG 250

Query: 237 QTVDVPTAAVRNFLVTHEGVPAELVYGMTKAMFTNMPDLLAAHSAAREI--DPAHAAKSP 294
              +V +  V   LVT E V   +VY +TKA+F N       H A   +  +    A + 
Sbjct: 251 TDQEVKSFGVAATLVTTEEVSEAVVYNLTKAVFENFDTFTRLHPAFANLKKEDMVTAGNS 310

Query: 295 IPLHPGAEKYYREAGLLK 312
           IPLHPGA KYY+EAGL+K
Sbjct: 311 IPLHPGAVKYYKEAGLIK 328