Pairwise Alignments

Query, 846 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

Subject, 900 a.a., hypothetical protein from Azospirillum brasilense Sp245

 Score =  125 bits (315), Expect = 8e-33
 Identities = 110/392 (28%), Positives = 183/392 (46%), Gaps = 31/392 (7%)

Query: 458 ALATEIAERRAAEDRVREREGQLRAILDAAPFPMVVASFPEGRVMFLNEPACELLNVSQD 517
           A+  ++  RR  E  +RE E + R + DA P  +V  +   GRV F N    +   ++ D
Sbjct: 381 AVTADLTVRRETEAALRESEARFRLMADAMP-QIVWITDAGGRVEFFNHQWTDYTGIAYD 439

Query: 518 -----RAIGQQASDFYSDADERRTL--IDQLGLSGAVLGVEMRVRRMPGVERWVLLSAVR 570
                  +    +DF    D   T    ++   +G++  VE R+R   G  RW L+  + 
Sbjct: 440 PRTSPTTVSDVIADFIHPDDAALTAERFEEAQRAGSLYLVEHRLRSKTGEYRWFLVRGLP 499

Query: 571 FVYNGQDSTLVCL-----NDITTRKDLENMLRLSGRRAEAALEAERQAMREQRNFLAMVS 625
             Y    S  +        DI   K  E +L+ +   AEAA        RE+ NFLA VS
Sbjct: 500 --YRDPHSGAITRWFGTSTDIHDHKHAEALLQQARDTAEAA-------SREKSNFLASVS 550

Query: 626 HEFRVPLAIIEAASQLLGIYLRANDD--ARDEVSKIRRAVRRMSELIDVCLADDRLDSSA 683
           H+ R P   ++AA+  L +  R   D  AR+ +  +  ++  ++ ++   L   RLD+  
Sbjct: 551 HDLRQP---VQAANLFLELLRRQPLDPKARELLKSLSDSMTSLTGMLSGLLEVARLDAGL 607

Query: 684 MRLQLDRVDVARMLSDICDDKRPFAGYRDLIIQAPQRAMAM-VDPTLLRIAFSNLIDNAL 742
           +  Q    D+  +L  +  + +  A    L +  P  A ++  DP L+ +   NLI NA+
Sbjct: 608 LAAQERVFDLDELLKRLYGEFQGPAREAKLRLHMPPAARSVRSDPLLVELVLRNLISNAV 667

Query: 743 KFSPADSPVTILVTADSDAVRVRVCDQGPGIALDEQPRIFEKFYR--STKSDRVRGAGLG 800
           K++     VT+    + D + + V D G GIA +E  RIF+ +Y+  +   +  RG G+G
Sbjct: 668 KYTEQGG-VTVETRVEKDRLAIDVTDTGRGIAPEEMERIFDPYYQIGNATREHARGFGIG 726

Query: 801 LYIVKRIMDLHGAAISVDSQGGAGTIFDVWLP 832
           L  V+R+ DL    ++V S+ G G+ F + LP
Sbjct: 727 LATVQRVADLLATRVTVRSEPGKGSTFSLTLP 758



 Score = 52.8 bits (125), Expect = 9e-11
 Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 23/193 (11%)

Query: 441 LEERVRQRTQELAQSNA----------------ALATEIAERRAAEDRVREREGQLRAIL 484
           LE RVRQ    L  +++                  A+ I  RR+ ++ +R  E +L A+ 
Sbjct: 222 LEHRVRQADGSLGWTHSRAVPILDADGEVCEWFGTASNITSRRSTDEALRRSEARLSALF 281

Query: 485 DAAPFPMVVASFPEGRVMFLNEPACELLNVSQDRAIGQQASDFY--SDADERRTLIDQLG 542
             A   +   + P+GR +  N+  C +L   ++  +G   +D     D    R  I+Q  
Sbjct: 282 ARAAVGLSELT-PDGRFLRANDELCRILGRPREEVVGLSVADVTHPDDLAASRMAIEQAL 340

Query: 543 LSGAVLGVEMRVRRMPGVERWVLLSAVRFV--YNGQDSTLVCLN-DITTRKDLENMLRLS 599
            +G  + ++ R RR  G + W   S +  V   NG +   + +  D+T R++ E  LR S
Sbjct: 341 RTGETVALDKRYRRPDGTDVWA-NSGITIVPGSNGDERRFLAVTADLTVRRETEAALRES 399

Query: 600 GRRAEAALEAERQ 612
             R     +A  Q
Sbjct: 400 EARFRLMADAMPQ 412