Pairwise Alignments

Query, 846 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

Subject, 678 a.a., histidine kinase from Cupriavidus basilensis FW507-4G11

 Score =  155 bits (392), Expect = 7e-42
 Identities = 124/444 (27%), Positives = 195/444 (43%), Gaps = 14/444 (3%)

Query: 36  LAIILWAGLASGPAAVAATPLSPETTEQSLAGHWSVLRDPSGQLEIKDVIGAA-AGGFSP 94
           + ++ W G ++  A +   P      E SL  HW +LRDP   L I+ +     A  F P
Sbjct: 7   IVLLCWLGHSAAWAEMRLPPAG----EVSLGEHWELLRDPQDVLTIEQLSRPEFAAAFQP 62

Query: 95  LEGDLAAGYDRASWWMRAEIRRSADTPADWLLEVEPAYLDFVTLYIEDGKGGFHVAMAGD 154
                A GY + + W+R  + R       WLLE+  A LD VTL+     GG+   ++GD
Sbjct: 63  QHSPPALGYVKGAVWLRITLTRPEQAAPVWLLELRSALLDDVTLFEPLAAGGYAQRVSGD 122

Query: 155 RVPFTAREVAYRTLVFRLHLADDLPHRVYLKVKSTSTITVSARLLSPAGFALGAARRDLA 214
           R P   R+V YR  VF+L L  D P  +YL+V+STST++      SP  F        L 
Sbjct: 123 RRPVAGRDVDYRNPVFQLDLPVDKPVTLYLRVRSTSTMSFPLVAWSPEAFISFIGTELLL 182

Query: 215 QGFAHGVLIIIILFAVVQYSAGRDRLYLSFLACAVPLECMHLARGGFASQYLFPQLPLVA 274
            G  +   +++++ +V  Y   R+  +  F    +      L+  GF  QYL P  PL +
Sbjct: 183 FGLFYAAHLVLLITSVWFYWVTRNLSFGLFSLTVLANLFTSLSAEGFTYQYLLPGWPLTS 242

Query: 275 DHLLGVSLCLSIGGAVIFAARVLDLEVYFPRLERIYMMIGRSCQWAALSVPA-----GIY 329
           D +  VS   +     +F A  L L   +    R + +      W    V       G  
Sbjct: 243 DAVYVVSWFFATPLGTLFTAHYLGL---YESPWRRWAIGFSLLAWGVALVMTPCLLLGNV 299

Query: 330 WLVAPMVVSTVIAFFAVTSILAVRRVMDGDVFTRWYLFAVQIPVMANVAIVSRTLGFAPM 389
           W + P+ +   +    +  I +      G    R  LF + +     V  ++R +G    
Sbjct: 300 WWIRPLALLWGLITMGILLIASAVMTWRGQKAARVLLFVLVLLFGGTVLRLARNVGAIDP 359

Query: 390 PMELDLFAHLGAGVHLLLIGSGLVWRGAAIEASRQRARQAQLESAQQIERALEERVRQRT 449
              +D   +LG    LL++ S + WR   + A ++ A+   L  A+Q ER LE +V  RT
Sbjct: 360 GPFVDNANYLGMMAFLLIMNSAISWRYTDMRAEKEAAQAEALRVARQAERDLEVKVALRT 419

Query: 450 QELAQSNAALATEIA-ERRAAEDR 472
           Q L  + A +   ++ ERRA E++
Sbjct: 420 QALRSAMAQVEASLSLERRAQEEQ 443



 Score =  130 bits (327), Expect = 3e-34
 Identities = 86/257 (33%), Positives = 135/257 (52%), Gaps = 15/257 (5%)

Query: 596 LRLSGRRAEAALEAERQAMREQRNFLAMVSHEFRVPLAIIEAASQLLGIYLRANDDARDE 655
           LR +  + EA+L  ER+A  EQR FL+ VSHE R PLA+I+A +Q L +     DDA D+
Sbjct: 422 LRSAMAQVEASLSLERRAQEEQRQFLSTVSHELRTPLAVIDATAQNLDL-----DDAHDD 476

Query: 656 ------VSKIRRAVRRMSELIDVCLADDRLDSSAMRLQLDRVDVARMLSDICDDKRPFAG 709
                   KI RA +R++ L++  L +D  +      +     +A +L D     +  + 
Sbjct: 477 PQTSARYQKILRATQRLTMLLNDSLHEDGFELLRHGSRPSPTRLADLLEDAAAAAQLLSE 536

Query: 710 YRDLIIQAPQRAMAM-VDPTLLRIAFSNLIDNALKFSPADSPVTILVTADSDAVRVRVCD 768
              L +   +       D +LLR+A   L DNA+K++PA   V +     ++ V + V D
Sbjct: 537 GHRLEVDGERLPETFPCDASLLRLALRTLADNAVKYTPAGCRVVLRGREVAEGVELEVQD 596

Query: 769 QGPGIALDEQPRIFEKFYRSTKSDRVRGAGLGLYIVKRIMDLHGAAISVDSQGGAG---T 825
            GPGI   + PR+FE+FYR   + +  G GLGL + +R++++ G  +++DS  G G   T
Sbjct: 597 NGPGIEATDLPRVFERFYRGQNAGQKPGTGLGLSLARRMVEMQGGTLTLDSAPGQGCRAT 656

Query: 826 IFDVWLPDGVGEQPNEL 842
           IF    P GV  Q + +
Sbjct: 657 IFLPSAPQGVQAQASAM 673