Pairwise Alignments

Query, 352 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  144 bits (362), Expect = 4e-39
 Identities = 80/198 (40%), Positives = 124/198 (62%), Gaps = 8/198 (4%)

Query: 145 MADLNRQLEQRLENSSNEVARLRNHLDDLKREASTDALTQLANRKLFDHSLNLAVLDARA 204
           + + NR+LE  ++  + E+A   N L+ L   ++TD LT + NR+LFD  L       + 
Sbjct: 144 LEERNRELESIIQARTYELAEANNRLEKL---SNTDGLTNIGNRRLFDQMLQKEWSRGQR 200

Query: 205 ADAPLSLLMIDIDHFKQFNDTYGHQLGDQVLKLVARSLSEVA-QAKDTAARYGGEEFAVI 263
            + PLSL+M+DIDHFK FND YGH  GD  LK++A  LS+   +A +  ARYGGEEF ++
Sbjct: 201 NNTPLSLIMLDIDHFKLFNDHYGHLAGDDCLKMLANGLSQSGRRAGELVARYGGEEFVIL 260

Query: 264 LPATPLEKSMEVAETIRNQVSTKRLTNRRTGQVLGQVTLSIGAALLREAEAPDS--LVHR 321
           LP T L+ +++ A+ +   + +  + + +T   LG VT+S+G A L  ++  ++  LVH+
Sbjct: 261 LPNTDLQTALDTAKHVHQLIQSLAIPHIKTN--LGIVTVSVGVACLLPSDKHNALELVHQ 318

Query: 322 ADEAMYLAKRDGRNRVKS 339
           AD A+YLAK  GRN ++S
Sbjct: 319 ADTALYLAKSAGRNCIRS 336