Pairwise Alignments

Query, 352 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 625 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  130 bits (327), Expect = 9e-35
 Identities = 76/201 (37%), Positives = 121/201 (60%), Gaps = 6/201 (2%)

Query: 143 KVMADLNRQLEQRLENSSNEVARLRNHLDD----LKREASTDALTQLANRKLFDHSLNLA 198
           KV A+ N +LEQ+++  + E+      L +    L  +++ D+LT + NR  FD  L   
Sbjct: 416 KVEAETNERLEQKVQERTLELEITLRELHEVNQKLTEQSTIDSLTGVKNRSAFDKRLLAE 475

Query: 199 VLDARAADAPLSLLMIDIDHFKQFNDTYGHQLGDQVLKLVARSLSE-VAQAKDTAARYGG 257
              +R  + P++LLM+DID FK  ND +GH  GDQ LKL+A++L + + +  D  +R+GG
Sbjct: 476 SRISRRQETPIALLMLDIDRFKSINDQFGHLAGDQALKLIAQTLQQHLKRPTDLVSRFGG 535

Query: 258 EEFAVILPATPLEKSMEVAETIRNQVSTKRLTNRRTGQVLGQVTLSIGAALLREAEAPDS 317
           EEFA+ILP T  + +++VAE+IR+ VS   LT       L  V++ + A ++   +    
Sbjct: 536 EEFAIILPNTTADGALQVAESIRDTVSCIGLTWEGKPIPL-TVSIGVSADVIMNEQHSTE 594

Query: 318 LVHRADEAMYLAKRDGRNRVK 338
           L+ +AD+A+Y AK  GRN+VK
Sbjct: 595 LLEQADKALYQAKNSGRNQVK 615