Pairwise Alignments

Query, 387 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 568 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score = 72.0 bits (175), Expect = 4e-17
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 4/151 (2%)

Query: 189 IWLAV----LGLAAGIGWAAWTAFKRVSQPINDMTATMRELAGGHLAVEIPSVEAHDEIG 244
           IWL+     LGL  G+  + + A   +  P+  +   M ++A G LAV IP VE  DE G
Sbjct: 194 IWLSRALTGLGLVVGMALSFFVALVGIVHPLARLREAMAKIAQGDLAVAIPGVERRDEAG 253

Query: 245 EMARAVRVFRDAMRAAEAMRQAQEKEREAAFAERVSALQSMAETVELETRAAVEQVAAQT 304
            MA AV +F+  M+    M +  ++       ER  A+  +A + E      V+ V+A +
Sbjct: 254 AMAGAVMIFKTNMQKNREMEEEAKQTDLRVQKERRDAMTQLANSFESRVMDVVKGVSASS 313

Query: 305 ALMAENAGQMANSAGAVGGSSQSVAAAASQA 335
             +   A  M+ SA      + +VAAAA QA
Sbjct: 314 TELQATAQSMSRSASQSNTQTTTVAAAAEQA 344



 Score = 31.2 bits (69), Expect = 8e-05
 Identities = 58/255 (22%), Positives = 97/255 (38%), Gaps = 64/255 (25%)

Query: 81  APAILKNVAEISRLMADWTALVPEAERGAFKPAVEQAAQFAAFRAELVRLGREVSTAEAR 140
           A  +  +++EISR +++ T +   A   A +   +   Q  A  A+  R+G  V      
Sbjct: 355 AEQLSASISEISRQVSESTRISTAASEEAAR--ADAMVQGLASTAD--RIGAVVKLI--- 407

Query: 141 TFGDND-ANRANRQALNKQIEALAAANSAKVSDLVQGLDEFYESRLQAMIWLAVLGLAAG 199
               ND A++ N  ALN  IEA  A  + K   +V G                V GLA  
Sbjct: 408 ----NDIASQTNLLALNATIEAARAGEAGKGFAVVAG---------------EVKGLANQ 448

Query: 200 IGWAAWTAFKRVSQPINDMTATMRELAGGHLAVEIPSVEAHDEIGEMARAVRVFRDAMRA 259
            G        R ++ I    A ++E                    E  R V   +     
Sbjct: 449 TG--------RATEEIGQQIAAVQE--------------------ETRRTVEAIKGITTV 480

Query: 260 AEAMRQAQEKEREAAFAERVSALQSMAETVELETRAAVEQVAAQTALMAENAGQMANSAG 319
            + +RQ       +A  E+ +A Q +A          V+Q A  T  ++ N   ++ S  
Sbjct: 481 IDQVRQI-SSSIASAVEEQGAATQEIARN--------VQQAAQGTRDVSHNIMGVSQSVA 531

Query: 320 AVGGSSQSVAAAASQ 334
           + GG+++ + A+AS+
Sbjct: 532 STGGAAEQLLASASE 546