Pairwise Alignments

Query, 340 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

Subject, 451 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score =  128 bits (322), Expect = 2e-34
 Identities = 103/304 (33%), Positives = 146/304 (48%), Gaps = 24/304 (7%)

Query: 49  GDYRRGLP--------LNEFRPLSPVAGTR-WRGQPLKGETVLILGEQGFGDNIQFVRYA 99
           GD+ +G P         +E R   P  G   W+G+ L  +T+LI GEQG+GD IQFVRY 
Sbjct: 147 GDWSQGWPEYESRLLVFSELRDRLPSFGCPLWQGEDLTNKTLLIWGEQGYGDQIQFVRYL 206

Query: 100 EPLARRGAR-----VVVGCQTGIGRLLSTAPGVSQVVESGQGMDRPDLVIPLMSLPYVFG 154
             L  R        +V      + R L+ A        + +     D  +PL+SLP   G
Sbjct: 207 SVLHDRWPETPLLLLVSEPLVDLFRQLAIANLQVATQFTFETESAYDFHLPLLSLPERLG 266

Query: 155 TTVQTIPARVPYLTAEPAAVAVWRERLSPYAGLKVGLVW--GGNPEAAYD---ARRSPGL 209
            T   IP    YL     +    R + +P   L+VG VW  G   +  Y    A +S  L
Sbjct: 267 ATADVIPLAQGYLPRSLQSEI--RLQANPRQ-LQVGFVWQAGETSDRRYQWRQASKSVPL 323

Query: 210 DPYLGL-LDLPGVTFFSLQKGPAAAALAGRSMPANFVDLGPELTDFDQSAAVMESLDLVI 268
           + +L L L +    F+SLQ GPA  +L      A+  DL   +  F  +AAV+  +DL+I
Sbjct: 324 EQFLQLRLQVNHCQFWSLQVGPARQSLLQNWDWAD-CDLADRMHSFADTAAVLNQMDLLI 382

Query: 269 SSCTSPAHLAGALGRPVWVVLASFPDWRWLLEREDSPWYPTARLFRAGRGEGWDPVLGRV 328
           +  T+ AHLAGAL  P W++L  F DWRW L   ++PWY + RL+R      W  V  ++
Sbjct: 383 TVDTAIAHLAGALEIPTWLLLPKFADWRWSLTGSETPWYQSMRLYRQAIAGDWRSVFEQL 442

Query: 329 RTAL 332
           +  L
Sbjct: 443 QQDL 446