Pairwise Alignments

Query, 297 a.a., hydroxymethylglutaryl-CoA lyase from Magnetospirillum magneticum AMB-1

Subject, 523 a.a., 2-isopropylmalate synthase (RefSeq) from Shewanella loihica PV-4

 Score = 54.3 bits (129), Expect = 6e-12
 Identities = 60/293 (20%), Positives = 116/293 (39%), Gaps = 35/293 (11%)

Query: 5   SRVKIVEVGPRDGLQNEARPVAVEIRVGLINRLTGTGLTAIESGSFVSPKWVPQMAATAE 64
           +RV I +   RDG Q  A  + V+ ++ +   L   G+  +E G  VS     +   T  
Sbjct: 3   NRVIIFDTTLRDGEQALAASLTVKEKLQIALSLERLGVDVMEVGFPVSSPGDFESVQT-- 60

Query: 65  VMAAITRRPGVAYPVLTPNLQGLEAALAAKVEEVAVFAAASETF--------SQKNINCS 116
                     +A  +    +  L  AL   ++  A   + +E F        S  ++   
Sbjct: 61  ----------IARTIKNSRVCALARALEKDIDAAAQSLSVAEQFRIHTFISTSTIHVESK 110

Query: 117 IAESLERFAPLAARAKAEGLRVRGYVSCVLGCPYEGAVEPSAVAGVAEKLVAMGCYEISL 176
           +  S ++   +A  A     R    V     C   G      +  + E  +  G   I++
Sbjct: 111 LKRSFDQVLDMAVGAVKYARRFTDDVE--FSCEDAGRTPIDNLCRMVEAAIKAGAKTINI 168

Query: 177 GDTVGVGTPAKAQAMIDAVTARLP---VEMLAAHFHDTYGQALANLLAVMERGVAVMDSS 233
            DTVG   P++   +I  +  R+P     +++ H HD  G ++AN +  ++ G   ++ +
Sbjct: 169 PDTVGYTVPSEFGGIIQNLFDRVPNIDQAVISVHCHDDLGLSVANSITAVQHGARQIECT 228

Query: 234 VAGLGGCPYAKGAAGNVASEDLVYML----NGMGIHTGIDLDRLIEAGTFICE 282
           V G+G        AGN + E++  ++      +G+ TGI+   +      + +
Sbjct: 229 VNGIG------ERAGNCSLEEIAMIIATRKASLGLETGINAKEIHRTSNLVSQ 275