Pairwise Alignments

Query, 586 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

Subject, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

 Score =  172 bits (436), Expect = 6e-47
 Identities = 107/265 (40%), Positives = 157/265 (59%), Gaps = 10/265 (3%)

Query: 319 VTERHAYQRALQEANEQLEQRVVERTRELDLARCQAEEANRCKSEFLANMSHELRTPLNA 378
           V  +H+  +A  +  E LEQ  ++   ELD+A+ +A+EA R KSEFLANMSHELRTPLN 
Sbjct: 250 VEMQHSIDQATSDLRETLEQLEIQNV-ELDIAKKRAQEAARVKSEFLANMSHELRTPLNG 308

Query: 379 IIGFSDVMRSGVFGPVGNARYGEYIGWIWDSGHHLLRIINDILDLAKVEVGRFDLSREST 438
           +IGF+   R  +   + N++  +Y+  I  S ++LL IINDILD +K+E G+  L     
Sbjct: 309 VIGFT---RQMLKTQLTNSQ-ADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPF 364

Query: 439 PVLPLLESAIRLVSERATRAEVNVGCKAEPGLGDAML-DPLRMKQVLLNLLSNAVKFTPA 497
               +LE  + L +  A    + +  K +P +   ++ DPLR++QVL NL+ N++KFT  
Sbjct: 365 EFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTER 424

Query: 498 GG---SVSLEA-RHEGTDLVLIVADTGIGMDEESLEKALQPFVQVESSLSRRYAGTGLGL 553
           G    SV + A R +  DL  +V DTGIG+ E    +  Q F Q ++S+SRRY GTGLGL
Sbjct: 425 GNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGL 484

Query: 554 PLAKSFSELHGGSLDLVSRPGEGTT 578
            + +      GG + L SR  +G+T
Sbjct: 485 VITQKLVSHMGGEISLTSRLHQGST 509