Pairwise Alignments

Query, 586 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

Subject, 933 a.a., hybrid sensory histidine kinase BarA (RefSeq) from Shewanella loihica PV-4

 Score =  172 bits (437), Expect = 4e-47
 Identities = 110/283 (38%), Positives = 162/283 (57%), Gaps = 14/283 (4%)

Query: 312 MVGSIGDVTE--RHAYQRALQEANEQLEQRVVERTRELDLARCQAEEANRCKSEFLANMS 369
           M GS+ +  E  +    +A  +  E LEQ  ++   ELDLA+ +A EA+R KSEFLANMS
Sbjct: 253 MAGSLSEYHEEMQQNIDQATSDLRETLEQIEIQNV-ELDLAKKRALEASRIKSEFLANMS 311

Query: 370 HELRTPLNAIIGFSDVMRSGVFGPVGNARYGEYIGWIWDSGHHLLRIINDILDLAKVEVG 429
           HELRTPLN +IGF+  +         +A   +YI  I  S  +LL IINDILD +K+E G
Sbjct: 312 HELRTPLNGVIGFAKQLLKTPL----HASQQDYIKTIEKSATNLLGIINDILDFSKLEAG 367

Query: 430 RFDLSRESTPVLPLLESAIRLVSERATRAEVNVGCKAEPGLGDAML-DPLRMKQVLLNLL 488
           + +L      +  +++  I L++  A   ++ +    EP + D +  D LR+ QV+ NL+
Sbjct: 368 KMELENMPFALREVIDDTISLLANSAKEKDLELVVDIEPSINDNVSGDALRVSQVITNLV 427

Query: 489 SNAVKFTPAGGSVSLEAR-----HEGTDLVLIVADTGIGMDEESLEKALQPFVQVESSLS 543
            NA+KFT +G SV L+ R      E  ++   + DTGIG+D+    +  Q F Q +SS+S
Sbjct: 428 GNAIKFTDSG-SVHLKMRLTSEEAEKVNVRCEITDTGIGIDKPHQAQLFQAFGQADSSIS 486

Query: 544 RRYAGTGLGLPLAKSFSELHGGSLDLVSRPGEGTTVTVRIPRK 586
           RR+ GTGLGL + K      GG +  +S PG+G+T    +P K
Sbjct: 487 RRFGGTGLGLIITKRLINRMGGQIGCISAPGKGSTFWFTLPLK 529