Pairwise Alignments

Query, 445 a.a., site-specific integrase from Magnetospirillum magneticum AMB-1

Subject, 402 a.a., Integrase from Dechlorosoma suillum PS

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 107/405 (26%), Positives = 171/405 (42%), Gaps = 32/405 (7%)

Query: 40  ALTDSVVKTLKPERGATTWREISDSGCRGLRLRVSPSGEKVWAVKVTVGAQRVRHTIGAY 99
           ALT+  +K  KP   A    ++SD   RGL L V+P+G K W VK     +     +G Y
Sbjct: 2   ALTELAIKASKP---ADKPYKVSDE--RGLFLLVNPNGSKYWRVKYRFLGKEKLLALGVY 56

Query: 100 PAVSLGEARKRAEAYLATARDGASPDELDARQRAETMTVTMAHSEYIEAM------RSSL 153
           P VSL +AR+R +       +G  P      ++A  M +    +   EA+      + S+
Sbjct: 57  PEVSLKQARERRDDARRLLANGVDP---GFHKQATKMAMVANAANSFEAVAREWWAKKSV 113

Query: 154 RASTISLKKT--MFKTHVEGALGKRLIRTVRRSDVVDVVGGVSAKGFPVQANRVFSEVMA 211
             S     K   +F+  V   +G R I  +   +++ VV  + A+G    A+        
Sbjct: 114 GWSASYSNKVIRLFERDVFPWVGARPIADITAPEMLAVVRRIEARGVIETAHLALRVSGQ 173

Query: 212 LLRWCEQKGYVDGVPSARKKDVRAATGGAKELARRRVLSEGEIIAVWNLTANMGDLTGDF 271
             R+    G  +  P     D+R A    K ++    ++E E   V  L   +   +G F
Sbjct: 174 AFRYAVVTGRAERSPVG---DLRGALPPVK-VSHFAAITEPE--KVGELLRAIDAFSGTF 227

Query: 272 -----LRLLLLTGQRRDEVRLMVWGEVDMDASLWTIPASRYKTGYSHTVPLPKQAMDILR 326
                L+L  L   R  E+R   W + D++   W    +  KT   H VPL  QA+ ILR
Sbjct: 228 VVLCALKLAPLFFVRPGELRHARWRDFDLERGEWRYLVT--KTQTQHLVPLATQAIGILR 285

Query: 327 SRW-VEGATGYVLAGRGENKPFNGAASAVRRLRKELGGKADFTLHDIRRTLRTGLA-RMG 384
             + + G   +V  GR    P +GA       R     + D T H  R   RT LA  + 
Sbjct: 286 ELYALTGRGDFVFPGRDRANPMSGATINAALRRMGYNTQTDITGHGFRAMARTILAEELH 345

Query: 385 IDETTAEMVIGH-IPQGIVKVYDQHDRMEERRTALKRWAEYVERV 428
           +     E  + H +P  +   Y++   ++ERR  ++ WA Y++ +
Sbjct: 346 VKPEVIEHQLAHRVPDNLGTAYNRTKFLKERRVMMQEWANYLDNL 390