Pairwise Alignments

Query, 281 a.a., IS3 family transposase from Magnetospirillum magneticum AMB-1

Subject, 276 a.a., transposase from Sinorhizobium meliloti 1021

 Score =  286 bits (731), Expect = 5e-82
 Identities = 142/270 (52%), Positives = 186/270 (68%), Gaps = 1/270 (0%)

Query: 1   MIEPKHPALSIGAQCHLLSIARSSFYYEPLGETEANLELMRLIDRQFLETPFYGVRQMAW 60
           MI+  H  LS+  Q  LL  +R S YY P   ++ +L LMR ID   L+ PF G R +  
Sbjct: 1   MIDRTH-RLSVVRQAKLLGFSRGSVYYSPRPVSDGDLALMRRIDELHLDYPFAGSRMLQG 59

Query: 61  HLQNEGHPVNVKRVRRLMRLMGLMPIYQKPNTSKPAKGHKTYPYLLRGLRIDRPNQVWCA 120
            L+ EG       V  LM+ MG+  IY++PNTSKPA GHK YPYLLR L + RPNQVW  
Sbjct: 60  LLKVEGLQAGRLHVATLMKKMGIEAIYRRPNTSKPAPGHKVYPYLLRKLAVTRPNQVWAM 119

Query: 121 DITYLPMRRGFLYLIAIMDWATRKVLAWRISNTLEADFCVEVLNEAILRFGPPEIMNTDQ 180
           D+TY+ M RGF+YL A++DW +R+VL+WR+S T+E  FC+E + EA+ R+G P+I NTDQ
Sbjct: 120 DLTYIRMARGFVYLCAVVDWFSRRVLSWRLSITMETAFCIEAVEEALARYGKPDIFNTDQ 179

Query: 181 GSQFTSFAWIDRLKRAGTRISMDGKGRCIDNVFIERLWRSLKYECVYLHAWETGSQARAG 240
           GSQFTS  +   LK+A   ISMDGKG   DNVF+ERLWRS+KYE VYLHA++T S+AR G
Sbjct: 180 GSQFTSVDFTAVLKKAEIAISMDGKGAWRDNVFVERLWRSIKYEEVYLHAYKTVSEARVG 239

Query: 241 IGPWITFYNHKRPHAAHGGRTPAVVYWNTI 270
           IG ++TFYN +RPH++   +TP   Y+N +
Sbjct: 240 IGRYLTFYNTRRPHSSLDRQTPDQAYFNAL 269