Pairwise Alignments

Query, 279 a.a., bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase from Magnetospirillum magneticum AMB-1

Subject, 269 a.a., formamidopyrimidine-DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

 Score =  188 bits (477), Expect = 1e-52
 Identities = 115/279 (41%), Positives = 155/279 (55%), Gaps = 12/279 (4%)

Query: 1   MPELPEVETVARGLAQVWDGRRFVSVETRRAGLRVPFPKDFARRLTGRTVEAVGRRAKYL 60
           MPELPEVE    G++    G    S+  R   LR P P++  ++L G+T+ A+ RRAKYL
Sbjct: 1   MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59

Query: 61  VVRLDGGLVMLGHLGMSGRMTIGALRNE-PPGPHDHVEWVTDQGISVTLTDPRRFGLFAL 119
           ++    G  ++ HLGMSG + I  L  + P   HDHV+ V   G  +   DPRRFG +  
Sbjct: 60  IIETAVGSAIV-HLGMSGSLRI--LDGDFPAAKHDHVDLVMTSGKRLRYNDPRRFGAWLW 116

Query: 120 CEASDLGGHPLLAGIGPEPLDEAFDAGVLAKALAGKTGPIKTVLLDQKVVAGLGNIYVCE 179
           C   +   H +L  +GPEPL EAF+A  +      K   +K  ++D   V G+GNIY  E
Sbjct: 117 CAPDE--SHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGVGNIYANE 174

Query: 180 SLFRAEISPLRPAGSLSRAEVGRLVPLIKAVLSEAVAAGGSTLRDHARPDGELGYFQHSF 239
           SLF + + PLRPA SLS  E   LV  IK VL  A+  GG+TL+D  + DG+ GYF    
Sbjct: 175 SLFTSRLHPLRPAHSLSLEEWQTLVANIKQVLQVAIKQGGTTLKDFTQSDGKPGYFAQEL 234

Query: 240 QVYGREGETCPGCPGAPACGGILRMTQAGRSTFYCAKRQ 278
           QVYG+  + CP C G P C        A R+TF+C + Q
Sbjct: 235 QVYGKAKQPCPHC-GEPLC----EQKIAQRNTFFCPQCQ 268