Pairwise Alignments

Query, 359 a.a., DNA recombination/repair protein RecA from Magnetospirillum magneticum AMB-1

Subject, 357 a.a., recA protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  462 bits (1188), Expect = e-135
 Identities = 228/339 (67%), Positives = 282/339 (83%), Gaps = 1/339 (0%)

Query: 15  DRQKALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTGSLGLDVALGIGGVPRGRIIE 74
           +++KAL A +SQIE+ FGKGSIMKLG +D+ ++ E +STGSL LDVALG GG+P GRI+E
Sbjct: 6   NKEKALAAVLSQIEKQFGKGSIMKLG-EDRSMDVETISTGSLSLDVALGAGGLPMGRIVE 64

Query: 75  VYGPESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGVNLDELLISQPDAGE 134
           +YGPESSGKTTL L +IA AQ++G TCAF+DAEHALDP YA+KLGV++D LL SQPD GE
Sbjct: 65  IYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124

Query: 135 QALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKLTGSVS 194
           QALEI D L RSGAVDV++VDSVAAL P+AE+EGE+GD+HMGL AR+MSQA+RKL G++ 
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184

Query: 195 KSKTIVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRMEIRRVGAIKDRDEVVGNQTR 254
           +S T++IFINQIRMKIGVMFGNPETTTGGNALKFYASVR++IRR GAIK+ DEVVGN+TR
Sbjct: 185 QSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNETR 244

Query: 255 VKVVKNKLAPPFKVVDFDIMYGEGISKMGELIDLGVKANVVEKSGAWFSYNSTRIGQGRE 314
           VKVVKNK+A PFK  +F I+YG+GI++ GEL+DLGV   ++EK+GAW+SY   +IGQGR 
Sbjct: 245 VKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQGRA 304

Query: 315 NAKTFLRENPAMAAEIEGAIRQNAGLISEALAGGPGDLD 353
           NA  +L ENPA+AAEI+  +R+       ALA    D D
Sbjct: 305 NAGKYLTENPAIAAEIDKTLRELLLSNPSALASSASDDD 343