Pairwise Alignments

Query, 174 a.a., PAS domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 710 a.a., PAS from Pseudomonas syringae pv. syringae B728a

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 7/137 (5%)

Query: 8   LSGVERTFGADEIIVSKTDTKGRIIYANEVFLRMAGFSEAEILNKPHSIIRHPD-MPRCV 66
           ++ ++R+ G  E      D  GR++ ANE FL++ G+   EI  + H +    D +    
Sbjct: 145 VAAIDRSQGIIEF-----DLNGRVLNANENFLKVLGYRLDEIQGQHHRMFCEDDYLNSPA 199

Query: 67  FKLLWDTIEAGKEIFAYVKNLSKNGDHYWVLAHVTPTFDKSGNIVSYHSNRRSPRRDAVE 126
           ++  W  +E G+      K + KNG   W+ A   P FD  G                + 
Sbjct: 200 YRAFWAKLERGEYDSGEYKRIGKNGRELWISATYNPIFDPDGRPYKVVKFANDVTESRIR 259

Query: 127 KAEALYKELLAIENSHS 143
           +AE+  K + AIE S +
Sbjct: 260 QAESAGK-VTAIERSQA 275



 Score = 46.2 bits (108), Expect = 1e-09
 Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 4/105 (3%)

Query: 26  DTKGRIIYANEVFLRMAGFSEAEILNKPHSIIRHPDMPRCV-FKLLWDTIEAGKEIFAYV 84
           D  G I+ AN  FL   G+   E+  + H +   P+    V +   W+ +  G       
Sbjct: 36  DLDGNILRANTNFLDCVGYRLDEVQGRHHRMFCTPEHASSVEYVTFWEKLGKGAFDEGQY 95

Query: 85  KNLSKNGDHYWVLAHVTPTFDKSGN---IVSYHSNRRSPRRDAVE 126
           K L KNG   W+ A   P FD+ GN   +V + ++  + R+   E
Sbjct: 96  KRLGKNGREIWLQATYNPVFDEQGNPFKVVKFATDVTAQRKSNAE 140



 Score = 44.7 bits (104), Expect = 4e-09
 Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 7/129 (5%)

Query: 22  VSKTDTKGRIIYANEVFLRMAGFSEAEILNKPHSIIRHPDMPR-CVFKLLWDTIEAGKEI 80
           V + D  G II AN  FL+  G+   EI  K H I    +  R   ++  W  +  G+  
Sbjct: 398 VIEFDMAGNIITANANFLKALGYGLLEIKGKHHRIFCEEEYVRGTEYREFWHGLGQGEFY 457

Query: 81  FAYVKNLSKNGDHYWVLAHVTPTFDKSG---NIVSYHSN--RRSPRRDAVE-KAEALYKE 134
                 +SK G   W+ A  +P FD  G    +V + ++  R+     A+E K  A+ + 
Sbjct: 458 SGRFMRVSKYGQKIWIQATYSPIFDHDGLPFKVVKFATDITRQVEMEQAIEAKTRAMGES 517

Query: 135 LLAIENSHS 143
           + A+ N+ S
Sbjct: 518 VKALMNAIS 526



 Score = 42.4 bits (98), Expect = 2e-08
 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)

Query: 22  VSKTDTKGRIIYANEVFLRMAGFSEAEILNKPHSIIRHPDMPRCV-FKLLWDTIEAGKEI 80
           V + D  G++++AN  FL + G+   EI+ + H +    +    + ++ LW+ +  G+  
Sbjct: 276 VIEFDLTGKVLHANRNFLAVFGYDLDEIVGEHHRMFCSEEFVSSLQYRELWEKLGRGEYD 335

Query: 81  FAYVKNLSKNGDHYWVLAHVTPTFDKSG 108
               K   K+G   W+ A   P FD  G
Sbjct: 336 ANEYKRKRKDGKEIWIQATYNPIFDAQG 363