Pairwise Alignments

Query, 407 a.a., nitrate ABC transporter from Magnetospirillum magneticum AMB-1

Subject, 425 a.a., ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component from Dechlorosoma suillum PS

 Score =  226 bits (576), Expect = 1e-63
 Identities = 133/363 (36%), Positives = 197/363 (54%), Gaps = 26/363 (7%)

Query: 4   EKTRLKLGIVPLIDAAPLVVAKERGFFAEMGLDVELSREASWASIRDKVAVGALDGAQML 63
           EKT +K+G +PL D A +V+A  +GF  + G+ +  ++EASWA++RDK+  G LD A +L
Sbjct: 53  EKTEVKIGFIPLTDCASVVMAAAKGFDKKYGIKIVPTKEASWAAVRDKLVNGELDAAHVL 112

Query: 64  APMPLAMSLGLSPIRVPMAVGMALNLGGNTITIGNALWERMEAADPQSMAARPVSARALK 123
             +   + LG+   +  MA  M LN  G  IT+ + L ++                 ALK
Sbjct: 113 YGLIYGVHLGIGGPKKDMASLMTLNNNGQGITLSSQLKDK-----------GVTDGAALK 161

Query: 124 RVIEADRAVGKPPMTFATVYPYSPHAAELRLWMEAAGIDTQAEVRFTVVPPPQMISFLSA 183
           ++I ++    K   TFA  +P   HA  L  W+ A  I+   +V+   VPPPQM++ +  
Sbjct: 162 KLISSE----KREFTFAQTFPTGTHAMWLYYWLAAHDINPMKDVKTITVPPPQMVANMRV 217

Query: 184 GNIDGYCVGEPWGSLAVRMNLGRIAATSGDIFAGRLEKVFAVTQTWAETHPETHLAVLQA 243
           GN+DGYCVGEPW + A+   +G  AAT+ DI+    EKV   T  WA  HP+T +AV  A
Sbjct: 218 GNMDGYCVGEPWNARAIIDKVGFTAATTQDIWTDHPEKVLGTTADWAAKHPKTAVAVTAA 277

Query: 244 LISAARWCD---DNRCELAELLAQPQYVNAPVDALLAPLLGEH--GLPKT------LLTF 292
           ++ A+RW D    NR E AE +A   YVN  VD +L  +LG +  G+ KT      +  F
Sbjct: 278 ILEASRWIDASLANRRETAETIAAKAYVNTDVDVILDRMLGRYSNGIGKTWDDKNHMKFF 337

Query: 293 HAQAANFPWRSQAMWYLEMMKRWDMAPFALDSRAAAEAVFRPDLYRVAALALGLRVPLTD 352
           +    NFP+ S  MW+L   +RW +     D    A+A+ +  LYR AA   G+ VP +D
Sbjct: 338 NDGQVNFPYLSDGMWFLTQHRRWGLLKDDPDYLGVAKAINQVGLYRQAAEKAGVAVPKSD 397

Query: 353 YKT 355
            ++
Sbjct: 398 LRS 400