Pairwise Alignments

Query, 407 a.a., nitrate ABC transporter from Magnetospirillum magneticum AMB-1

Subject, 455 a.a., nitrate transporter substrate-binding (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  226 bits (576), Expect = 1e-63
 Identities = 141/373 (37%), Positives = 194/373 (52%), Gaps = 31/373 (8%)

Query: 1   MSVEKTRLKLGIVPLIDAAPLVVAKERGFFAEMGLDVELSREASWASIRDKVAVGALDGA 60
           + VEK  LK G + L D APL +A ERG+F + GL V L  +A+W  + D V  G LDGA
Sbjct: 23  LPVEKDELKFGFIKLTDMAPLAIAYERGYFFDEGLFVTLEAQANWKVLLDGVISGQLDGA 82

Query: 61  QMLAPMPLAMSLGLSPIRVPMAVGMALNLGGNTITIGNALWERMEAADPQSMAARP---V 117
            MLA  PLA ++G    +  +    +++L GN IT+ N +WE+M+   P+    RP   +
Sbjct: 83  HMLAGQPLAATIGYGT-QAHIVTPFSMDLNGNGITVSNEIWEQMKPNIPKMEDGRPQHPI 141

Query: 118 SARALKRVIEADRAVGKPPMTFATVYPYSPHAAELRLWMEAAGI------------DTQA 165
           SA ALK +++   A G+P      V+P S H  ELR W+ A GI               A
Sbjct: 142 SASALKPIVDEYNASGRP-FNMGMVFPVSTHNYELRYWLAAGGIHPGFYSPEDVSGQINA 200

Query: 166 EVRFTVVPPPQMISFLSAGNIDGYCVGEPWGSLAVRMNLGRIAATSGDIFAGRLEKVFAV 225
           E   +V PPPQM + L AG I GYCVGEPW   AV   +G    T   I+    EKVF +
Sbjct: 201 EAFLSVTPPPQMPATLEAGTIYGYCVGEPWNQQAVFKGIGVPVITDYQIWKNNPEKVFGL 260

Query: 226 TQTWAETHPETHLAVLQALISAARWCDD----NRCELAELLAQPQYVNAPVDALLAPLLG 281
           T  + E +P T LA+ +ALI AA W D+    NR E  E+L++P YV A  D +   + G
Sbjct: 261 TAAFVEENPNTTLAITKALIRAAIWLDENDNANRPEAVEILSRPNYVGADYDVIANSMTG 320

Query: 282 ----EHGLPKTLLTFHA---QAANFPWRSQAMWYLEMMKRWDMAPFALDSR---AAAEAV 331
               E G  + +  F+      A +P+ S A+WYL  M+RW     A         A  V
Sbjct: 321 FFEFEKGDRRDIPDFNVFFRYNATYPFYSDAVWYLTQMRRWGQISEAKPDSWYDEVARMV 380

Query: 332 FRPDLYRVAALAL 344
           ++P++Y  AA  L
Sbjct: 381 YKPEIYLEAARLL 393