Pairwise Alignments

Query, 407 a.a., nitrate ABC transporter from Magnetospirillum magneticum AMB-1

Subject, 392 a.a., putative nitrate transport protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  247 bits (631), Expect = 4e-70
 Identities = 145/399 (36%), Positives = 216/399 (54%), Gaps = 25/399 (6%)

Query: 3   VEKTRLKLGIVPLIDAAPLVVAKERGFFAEMGLDVELSREASWASIRDKVAVGALDGAQM 62
           + +  L +G +PL+DAAPL++A++ GF    G+ + L ++ SW+++RD VA+G LD   M
Sbjct: 1   MSRAPLNIGYLPLVDAAPLIIAQKMGFADTEGIRLALHKQPSWSALRDGVALGTLDAGHM 60

Query: 63  LAPMPLAMSLGLSPIRVPMAVGMALNLGGNTITIGNALWERMEAADPQSMAARPVSARAL 122
           L+P+P+AMSLGL  +   M   + +++ GN I + N L  +M +   +     P++    
Sbjct: 61  LSPLPVAMSLGLGGLPTAMDALLVMSVNGNVIGVSNGLASKMRSNGWREDFRDPLATG-- 118

Query: 123 KRVIEADRAVGKPPMTFATVYPYSPHAAELRLWMEAAGIDTQAEVRFTVVPPPQMISFLS 182
           K +I   RA G+  +     +P+S HA  +  W+ A G+ T  E+    VPPP M   ++
Sbjct: 119 KHLI---RASGRK-LRIGVPFPFSMHAELVYFWLNALGLKTPDELDVRTVPPPHMADAIA 174

Query: 183 AGNIDGYCVGEPWGSLAVRMNLGRIAATSGDIFAGRLEKVFAVTQTWAETHPETHLAVLQ 242
           A  ID +CVGEPWGS+AV   +G +   +  I+    EKV A  + W ET+P    A+++
Sbjct: 175 ANEIDAFCVGEPWGSIAVETGVGELILPANSIWTFSPEKVLAARRDWIETNPAETRALMR 234

Query: 243 ALISAARWCDD--NRCELAELLAQPQYVNAPVDALLAPLLGE---------HGLPKTLLT 291
           A+++AARW  D  NR   +E+LAQP  ++ P + +   L G+         H +P+  L 
Sbjct: 235 AVVTAARWLGDPENRLVASEILAQPGLIDVPSEVIDRALSGQITSKPKALAHRVPR-FLE 293

Query: 292 FHAQAANFPWRSQAMWYLEMMKRWDMAPFALDSRAA---AEAVFRPDLYRVAALALGLRV 348
           FHA AANFPWRSQA W    +     A   LD   A   + A +R DLYR     LGL +
Sbjct: 294 FHASAANFPWRSQAAWIASNI----AARVGLDRTEAMRISMACYRSDLYRANLTDLGLDM 349

Query: 349 PLTDYKTEGGHAAPWNLLKATRPIEMGPDLLLGGGTFDP 387
           P    K EG  A P  +  A   I +GPD    G  FDP
Sbjct: 350 PGASAKMEGALAQPTPVASAKGSIILGPDAFFDGSIFDP 388