Pairwise Alignments

Query, 703 a.a., carboxypeptidase from Magnetospirillum magneticum AMB-1

Subject, 700 a.a., penicillin-binding protein, 1A family from Sphingomonas koreensis DSMZ 15582

 Score =  442 bits (1137), Expect = e-128
 Identities = 248/607 (40%), Positives = 366/607 (60%), Gaps = 13/607 (2%)

Query: 57  PKKGGS--GNGRKWGKRLLVWGLTLAIWIGIGLAGVVAYYALDLPDIDRMTAQTRRPSVV 114
           PKK  +  G  R+  K +L+ G+TLA+   I L   V      LP  + + +      + 
Sbjct: 2   PKKSPARPGKFRRILKWVLIGGVTLALAGLIALTIAVYTARASLPSFEELKSSPNGQMIR 61

Query: 115 FQSVEGEIFAAYGDLYGEPLDLGEMSPFIAQAVLATEDRRFYSHWGVDPIGLARAL---F 171
             +V+G + A+ G  YGE +D  ++   +  A+++ EDRRF SHWGVDP+ LAR     F
Sbjct: 62  VHAVDGTVIASLGPSYGEWIDYSKIPAPMRDAMVSIEDRRFRSHWGVDPVALARITKFAF 121

Query: 172 VNLRAGHTVQGGSTITQQLAKNLFLTPDRNMKRKVQEVLMALWLEKRFSKEQILGLYLNR 231
            +      +QG STITQQ+A+ +FL+   ++ RK++E+++AL LE++F+K+QIL LYLN+
Sbjct: 122 DHRGTDRRLQGASTITQQVARTIFLSNKYDVGRKLREMVLALALERKFTKDQILELYLNK 181

Query: 232 VYLGSGTFGVDAAAKRYFDVSARKVDVYQAAVLAGLLKAPSRYSPLNDPEASRKRTSDVL 291
           VY G G +G+DAA++ +F   A  + + ++AV+AGL+KAPSRYSP  D EA+  R S VL
Sbjct: 182 VYFGGGAYGIDAASRTFFGHPATNLTLSESAVIAGLVKAPSRYSPTADAEAAIGRASVVL 241

Query: 292 ANMVKAGYIDQKTADNVQVTGAAQLVRRPIPAGRYFADWLMANLDQFGEVAGKDIVVHTT 351
             MV+ G + +  AD  +             + RYF DW +  L+   +     + V TT
Sbjct: 242 DVMVETGALTRAQADAARPAEVKLAAAPKQNSVRYFTDWALPQLEVLIDETEAPLDVWTT 301

Query: 352 MDIALQRKVEADLKTMMAGPGAKANASQGAVVVMSPDGAIRALTGGKDYDDSQFNRATQG 411
           +D+ +Q    A  + + A   A A   QGA+V +  DGA+RA+ GG+DY  S +NRATQ 
Sbjct: 302 IDLRMQN---AATQAIQANTPAGA---QGALVSLDRDGAVRAMVGGRDYVSSIYNRATQA 355

Query: 412 LRQPGSSFKPFVYLTAMEMGRTPDDEVEDKPIRLGNWSPGNYTGKYLGPITLRQALAESV 471
            RQPGS+FK FVYL A+E G  PDD+V D+P+ +G WSP N +G++ G ++LR A A S+
Sbjct: 356 TRQPGSAFKLFVYLAALEAGHKPDDQVVDEPVTIGGWSPRNNSGRFSGEMSLRSAFAYSI 415

Query: 472 NTVAVRLVEEVGPGRVIATARRLGITSDLRNDATLALGTSEVSLLELTTAYAALANGGYG 531
           NTVA +L +EVG G V   ARR GIT+ +     + LGTS V L+++T A+A++AN G G
Sbjct: 416 NTVAAKLGQEVGFGTVADMARRFGITTPVNTQPAMVLGTSNVRLIDMTRAFASVANKGVG 475

Query: 532 VTSFGVSHITDPSGKVLYQRQGGGFGQVVSPAALSRMHDMMSAVVTQGSGKAARLDRPVA 591
           VT + ++ +T  +G V+YQ +      +V+P   ++M D+M   V  GSGKAA++ RPVA
Sbjct: 476 VTPYAITRVT-ANGAVIYQHEVDTSRVLVAPYVAAQMTDLMQTAVATGSGKAAQIGRPVA 534

Query: 592 GKTGTTQDYRDAWFMGFTADYVAGVWMGNDDYRIEMKKVTGGGLPAQLWKQVMTAAHRGL 651
           GKTGTT   +D WF+GF++    GVWMG DD +  +  + GG  PA+ +   M  A    
Sbjct: 535 GKTGTTTSNKDGWFLGFSSGLTTGVWMGRDDAK-RVGGLQGGAAPARAFAAFMRPAVANR 593

Query: 652 PARPLRT 658
           PA    T
Sbjct: 594 PAEEFET 600