Pairwise Alignments

Query, 703 a.a., carboxypeptidase from Magnetospirillum magneticum AMB-1

Subject, 705 a.a., penicillin-binding protein, 1A family from Sphingomonas koreensis DSMZ 15582

 Score =  431 bits (1107), Expect = e-125
 Identities = 256/634 (40%), Positives = 354/634 (55%), Gaps = 20/634 (3%)

Query: 46  RAPKEPKKPKAPKKGGSGNGRKWGKRLLVWGLTLAIWIGIGLAGVVAYYALDL------P 99
           RAP  P        GG G+    G RL +       W   G+A  +  + + +       
Sbjct: 18  RAPAVPPLDPFDGLGGGGDVPPAGPRLPLRRRPWWRWTMRGIAAFIVLFVVTIGWLVFTA 77

Query: 100 DIDRMTAQTRRPSVVFQSVEGEIFAAYGDLYGEPLDLGEMSPFIAQAVLATEDRRFYSHW 159
            + +       PS+   S EG   A  G   G+P+D  ++   +  A +A EDRRF SHW
Sbjct: 78  PLSKSLEPPVPPSITLLSAEGTPIARTGAEVGKPVDATKLPAHVVDAFIAVEDRRFRSHW 137

Query: 160 GVDPIGLARALFVNLRAGHTVQGGSTITQQLAKNLFLTPDRNMKRKVQEVLMALWLEKRF 219
           G+DP G+ RA   N+    + QGGSTITQQLAKN FL+  R   RK QEVL+A WLE   
Sbjct: 138 GIDPRGITRAFVNNVFTSKSSQGGSTITQQLAKNAFLSSKRTFGRKFQEVLIAFWLEAWL 197

Query: 220 SKEQILGLYLNRVYLGSGTFGVDAAAKRYFDVSARKVDVYQAAVLAGLLKAPSRYSPLND 279
           +K++IL  YL+ VY G   +G+DAAA+ YF   A ++   QAA+LAGL+KAPSR +P  +
Sbjct: 198 TKDEILSRYLSNVYFGDNQYGLDAAARHYFSRPATELTTGQAAMLAGLVKAPSRLAPSGN 257

Query: 280 PEASRKRTSDVLANMVKAGYIDQKTADNVQVTGAAQLVRRPIPAGRYFADWLMANL-DQF 338
            + +++R + V+  MV AG + +  A  +          + +P+G YF DW++    DQ 
Sbjct: 258 LKGAQERQAVVVGTMVDAGLLTEAEARAIGPARLRLARSKALPSGTYFTDWVLPEARDQA 317

Query: 339 GEVAGKDIVVHTTMDIALQRKVEADLKTMMAGPGAKANASQGAVVVMSPDGAIRALTGGK 398
           GE+ G    V TT++  +QR  E  ++       A    SQ A+V M PDG + A+ GGK
Sbjct: 318 GEL-GAVREVTTTLETRMQRAAERAVRN------AGLRQSQIAIVSMRPDGRVIAMVGGK 370

Query: 399 DYDDSQFNRATQGLRQPGSSFKPFVYLTAMEMGRTPDDEVEDKPIRLGNWSPGNYTGKYL 458
           +Y +S FNRATQ  RQPGS+FK FVYL A+  G TPD  V D+P+ +G W P N  G+Y 
Sbjct: 371 NYGESPFNRATQARRQPGSTFKLFVYLAALRSGMTPDSTVLDEPVTIGEWKPKNSDGRYR 430

Query: 459 GPITLRQALAESVNTVAVRLVEEVGPGRVIATARRLGITSDLRNDATLALGTSEVSLLEL 518
           G ITLRQA A S N  A RL ++VGP  VI  AR LGI++ +  +A++ALGTS VSLLEL
Sbjct: 431 GEITLRQAFARSSNVAAARLTKDVGPAAVIRAARDLGISTPIAEEASIALGTSTVSLLEL 490

Query: 519 TTAYAALANGGYGVTSFGVSHITDPSGKVLYQRQGGGFGQVVSPAALSRMHDMMSAVVTQ 578
           T AYAA+ANG   V   G+S   +P     +  +  G  + +    L+ M ++++A V +
Sbjct: 491 TAAYAAIANGEAPVRPRGLSETDEPG----WLDRFTGSQRPIGNRELAGMRELLNASVHE 546

Query: 579 GSGKAARLDRPVAGKTGTTQDYRDAWFMGFTADYVAGVWMGNDDYRIEMKKVTGGGLPAQ 638
           G+G+ A L     GKTGTTQD RDA F+G+    V  VWMGNDD       + GGG PA+
Sbjct: 547 GTGRGAALSVETFGKTGTTQDNRDALFVGYADGIVTAVWMGNDD-NTPNPGLAGGGAPAR 605

Query: 639 LWKQVMTAAHRGLPARPLRTPEVPAESSPAESVG 672
           +W+  M  A  G+  +    P V   S   + VG
Sbjct: 606 VWRDFMARA-LGVAVQARPEPVVENLSEVIDDVG 638