Pairwise Alignments

Query, 727 a.a., hybrid sensor histidine kinase/response regulator from Magnetospirillum magneticum AMB-1

Subject, 933 a.a., hybrid sensory histidine kinase BarA (RefSeq) from Shewanella loihica PV-4

 Score =  288 bits (736), Expect = 1e-81
 Identities = 211/696 (30%), Positives = 344/696 (49%), Gaps = 63/696 (9%)

Query: 51  IAERIRAEAKLQR----------LLAALGEQKADLEMLVHTITQHSDEI--DIEQELAN- 97
           I E +R  AK++           L+  L   K  +  +  +++++ +E+  +I+Q  ++ 
Sbjct: 216 ITEMVRVVAKIREGKLDTRVDGNLIGELDLLKRGINAMAGSLSEYHEEMQQNIDQATSDL 275

Query: 98  ----EQLRLENERINLAKEQAESLAQAKTEFVAVVSHEVRTPMNGLLGMTQLLLDTPLTQ 153
               EQ+ ++N  ++LAK++A   ++ K+EF+A +SHE+RTP+NG++G  + LL TPL  
Sbjct: 276 RETLEQIEIQNVELDLAKKRALEASRIKSEFLANMSHELRTPLNGVIGFAKQLLKTPLHA 335

Query: 154 EQRDIAGTVMSSGRLLLNILDELLDLSKIEAGKLQIEHLEVKVVDLVEESFGLMSMRATE 213
            Q+D   T+  S   LL I++++LD SK+EAGK+++E++   + ++++++  L++  A E
Sbjct: 336 SQQDYIKTIEKSATNLLGIINDILDFSKLEAGKMELENMPFALREVIDDTISLLANSAKE 395

Query: 214 RGLAVAHAIAPDVPAMVTGDPSRLRQVLLNLIGNAIKFTEKGSVTLTVTRVPVHRTGGEG 273
           + L +   I P +   V+GD  R+ QV+ NL+GNAIKFT+ GSV L + R+         
Sbjct: 396 KDLELVVDIEPSINDNVSGDALRVSQVITNLVGNAIKFTDSGSVHLKM-RLTSEEAEKVN 454

Query: 274 LRFAVADTGIGIPEEARDQLFRRYVQAAAWVSRKFGGTGLGLSICRQLVELMGGEIGVDS 333
           +R  + DTGIGI +  + QLF+ + QA + +SR+FGGTGLGL I ++L+  MGG+IG  S
Sbjct: 455 VRCEITDTGIGIDKPHQAQLFQAFGQADSSISRRFGGTGLGLIITKRLINRMGGQIGCIS 514

Query: 334 VAGQGSVFWFQIP--LIPVAASPGRSRPAHAPARLLLLEPEAPVRTALTTILAGWGIQVM 391
             G+GS FWF +P  L P   S            +LL EP    R    ++L+ WG+Q +
Sbjct: 515 APGKGSTFWFTLPLKLSPYPISQPLETDNLIDKTVLLFEPRELSRKVHESLLSHWGMQNI 574

Query: 392 EATKAS-----AATLGRPGDVLLLGGRMALSEAQVLARNSGLAAI---ILSPLGTTPTTG 443
             T A      A   GR  D  ++      S   +L   + +A I    L    +T +  
Sbjct: 575 SITTAEDLARVAGEEGRHFDYAIISCNDLASSPNLLNVLNKIAKISDYTLYLCSSTDSAA 634

Query: 444 ETDAV-----AILPEPVREAALIRALDQFGAPGRAIGPGPADLPHRGQEAA--------- 489
           +   +      ++  PV E AL   L                 PHR Q  A         
Sbjct: 635 KMSLIQPNVDKVMQAPVGERALAVTLIN---------------PHRAQYEAMPFQEAVKE 679

Query: 490 -QAGQSLTVLVVEDNPVNRRVAGGFLSRQGHTVLMAENGAQALEVIASHPVDIILMDRHM 548
            Q  + ++VL V+DNP N ++    L      V + +NG +A+E+  +   D+I MD  M
Sbjct: 680 TQEREPMSVLAVDDNPANLKLIKTLLKELVTQVTVTDNGQEAVEIAKAKSFDLIFMDIQM 739

Query: 549 PVMDGLQAVRALRAMPPPAGHLPVVALTAAATREEARECLDAGMNDFISKPFTPEQLTEA 608
           P  DG  A + +R       + P+VA+TA A  EE      +GM+ ++ KP     L   
Sbjct: 740 PGTDGFSATKQIREHSLNR-NTPIVAVTAHAIAEERERIDQSGMDGYLPKPIDEAALKSV 798

Query: 609 IDRQMRGRLTADFDRAAL---VTLSERIGDDGL-VEIIGDYRTVSQSLAEAIVRAATMRD 664
           I R         FD+  L   + L++      L +E++           E I  A   +D
Sbjct: 799 ISRWKTRPQFTHFDQHTLNWDLCLTQANQKTSLALEMLQMLVDSLPETREHISGALERQD 858

Query: 665 GQALGEAAHSLSGCSGQLGLNGISGLCRAVEGALRE 700
            QA+    H L G S   G+     LCR +E +L++
Sbjct: 859 SQAMVSHVHKLHGASCYCGVPTTQRLCREIEQSLKQ 894