Pairwise Alignments

Query, 504 a.a., UbiD family decarboxylase from Magnetospirillum magneticum AMB-1

Subject, 613 a.a., 4-hydroxy-3-polyprenylbenzoate decarboxylase from Vibrio cholerae E7946 ATCC 55056

 Score =  548 bits (1411), Expect = e-160
 Identities = 271/469 (57%), Positives = 339/469 (72%), Gaps = 12/469 (2%)

Query: 1   MPYESLRDFIARLEKAGRLKRVSAPVSPHLEMTEIQTRLLAEGGPAVLFENVVRDDGSKY 60
           M ++ LRDF+  LE+ G LKR++ P+ PH EMTEI  R L   GPA+LFEN +      Y
Sbjct: 1   MNFKDLRDFLDYLEQRGELKRITHPIDPHYEMTEISDRTLRAKGPALLFENPLG-----Y 55

Query: 61  SMPVLVNLFGTVERVAWGMDREPHQ-LREVGETLAFLKQPEPPGGWREALEMLPLAKTVM 119
             PVL NLFGT ERVA GM R+  Q LR+VG+ LA+LK+PEPP G +E +E LP+ K V+
Sbjct: 56  DFPVLTNLFGTPERVAMGMGRQQVQELRDVGQWLAYLKEPEPPRGLKELIEKLPVFKQVL 115

Query: 120 AMRPKTVGSAPCQQVVLTGDQVDLSQLPIQGCWPGEPAPLITWPLVVTQGPNPDGDKRDN 179
            M  K +  APCQ++V  GD VDL ++P+  CWP + APL+TW L +T+GP+    KR N
Sbjct: 116 NMPVKRLRRAPCQEIVWQGDAVDLDKIPVMSCWPDDVAPLLTWGLTITRGPHK---KRQN 172

Query: 180 FNLGIYRMQVTGKNTTLMRWLKHRGGAQHFQRWGQEKR-QPMPAAVVIGADPGTIIAAVT 238
             LGIYR Q   +N  +MRWL HRGGA   + W ++   +P P +V  GADP TI+ AVT
Sbjct: 173 --LGIYRQQKIARNKVIMRWLAHRGGALDLRDWMEKHPGEPFPVSVAFGADPATILGAVT 230

Query: 239 PVPETLSEYQFAGLLRGKKLELVDCKTVPLKVPAEAEIVLEGHVMLDEHGPEGPYGDHTG 298
           PVP+TLSEY FAGLLRG + E+V   +  L+VPA AEIVLEG++  +E   EGPYGDHTG
Sbjct: 231 PVPDTLSEYAFAGLLRGSRTEVVKSISNDLEVPASAEIVLEGYIDPNEFADEGPYGDHTG 290

Query: 299 YYNSVEEFPVFRISAITMRRDPIYLSTFTGRPPDEPSVLGEALNEVFIPLLAQQFPEIVD 358
           YYN VE   VF ++ +TMR  PIY ST+TGRPPDEP+VLG ALNEVF+P+L +QFPEI D
Sbjct: 291 YYNEVERHHVFTVTHVTMRNKPIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIAD 350

Query: 359 FWLPPEGCSYRIAVVSIKKAYPGHAKRVMFGIWSFLKQFMYTKFVIVVDDDIDARNWKDV 418
           F+LPPEGCSYR+A+V++KK YPGHAKRVM G+WSFL+QFMYTKFVIV D+ ++AR+W  V
Sbjct: 351 FYLPPEGCSYRMAIVTLKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVCDEQVNARDWPQV 410

Query: 419 MWAISTRMDPARDITVVEGTPIDYLDFASPESGLGGKLGLDATNKWPPE 467
           + A+   M P RD   +E TPID LDFASP  GLG K+GLDAT KWP E
Sbjct: 411 IAAMVNHMSPLRDTLFIEHTPIDSLDFASPVVGLGSKIGLDATAKWPAE 459



 Score = 84.0 bits (206), Expect = 1e-20
 Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 15/133 (11%)

Query: 363 PEGCSYRIAVVSIKKAYPGHAKRVMFGIWSFLKQFMYTKFVIVVDDDIDARNWKDVMWAI 422
           PE  + ++ ++ I K   G A++++  +   L      KFVI+ DDD++  +W DV+WA+
Sbjct: 495 PEAANDKLVLLLINKQEAGQAQQLLQRVVDKLNGDSPLKFVILCDDDVNIHDWNDVIWAM 554

Query: 423 STRMDPARDITVVEGTPIDYLDFASPESGLGGKLGLDATNKWPPETHREWGEKIKMSGDV 482
           +TRMDPARD   + G  +               +  DATNK P E  REWG  I+    +
Sbjct: 555 TTRMDPARDSLRIVGQDL---------------ICFDATNKLPDEVEREWGTPIRKDPKL 599

Query: 483 VDRVSQRWAEYGL 495
           V ++   W E G+
Sbjct: 600 VAKIDSLWDELGI 612