Pairwise Alignments

Query, 443 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 567 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  189 bits (479), Expect = 3e-52
 Identities = 104/269 (38%), Positives = 165/269 (61%)

Query: 175 FEKNVHDMVSQVASATTGIGRTAQTMASRSESAGGRSITVGEAAETTTQLASAVSESTRQ 234
           F+  +  +V ++  +++G+  TA+ M+  + +   ++ T  +A  + +     V+ +  +
Sbjct: 297 FQDRIGGLVGKLTESSSGLETTARAMSEAARATDTQAATASDAVGSASMGVRTVAAAAEE 356

Query: 235 LAQAINEIAQQVTQSASVAQTAVSDIGETVECMNGLADSVSQIGVVVQLINDIAAQTNLL 294
           L+ +I+EI+ +V QS+ V Q A++   ET + +  LA+   +IG VV LIN IA+QTNLL
Sbjct: 357 LSASISEISGKVQQSSEVTQKAMARAAETDKMVGRLAEGADRIGEVVSLINAIASQTNLL 416

Query: 295 ALNATIEAARAGEAGKGFAVVANEVKNLANQTARATDDISRQVGAVQGAAQAAATGVAGV 354
           ALNATIEAARAG+AGKGFAVVA EVK LANQTARAT++I  Q+G +Q A +     +  +
Sbjct: 417 ALNATIEAARAGDAGKGFAVVAGEVKTLANQTARATEEIGAQIGRIQEATRETIQAIKEI 476

Query: 355 VSTIRTIDGIASAIASAVQEQEAVTRDISAHIDEVATKASEVSENVAHLSQSTAQACGGT 414
             TI  I+GI  ++ASAV+EQ A T +I+  +  V+T   EV+ NV  +S++        
Sbjct: 477 SGTIGEINGIVMSVASAVEEQSAATAEIARTVQRVSTNTDEVTTNVDGVSRTAKATDSAA 536

Query: 415 VRVIWSARTLSKVVEALNDEVNAYVSKVR 443
             V+ ++  L+ V   L  E++ +V  VR
Sbjct: 537 ADVLRASGDLTTVSGELGGEIDRFVGGVR 565



 Score = 30.4 bits (67), Expect = 2e-04
 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 18/140 (12%)

Query: 285 NDIAAQTNL-----------LALNA-TIEAARAGEAGKGFAVVANEVKNLANQTARATDD 332
           +DIAAQ  +           L  NA TIEAARA EA     V  + ++ L+ + A A + 
Sbjct: 119 DDIAAQAEIWRTRVAEREIALMNNAETIEAARALEASGAGKVPMDAIRRLSGEIAGAEEA 178

Query: 333 ISRQVGAVQGAAQAAATG---VAGVVSTIRTI---DGIASAIASAVQEQEAVTRDISAHI 386
           + +Q  A    A A       V GVVS +  +     +   I   V+    V  ++SA  
Sbjct: 179 LLKQRTAEMEEALALGRNTMIVGGVVSVVLAVLLGWQLTRGIVQPVRLLTGVMGELSAGG 238

Query: 387 DEVATKASEVSENVAHLSQS 406
             VA   ++  + +  ++++
Sbjct: 239 RGVAIPETDRGDEIGQMAKA 258