Pairwise Alignments

Query, 290 a.a., helix-turn-helix domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 183 a.a., shikimate kinase from Burkholderia phytofirmans PsJN

 Score = 64.7 bits (156), Expect = 1e-15
 Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 3/161 (1%)

Query: 120 VALIGLRGAGKTTLGEAVAGRFAAPFRRITSMIEQMAGMDMTEILLSTGQKGYRKLEYSA 179
           V  +GL GAGKTT+G A+A R   PF      IE   G  +  I    G+ G+R+ E S 
Sbjct: 10  VFFVGLMGAGKTTVGRAIARRLDRPFFDSDHEIEARTGARIPVIFELEGEAGFREREASV 69

Query: 180 LENTLEAQPTMVLEAGGSLVSEPRTFELLLQSCFTIWVQASPEDHMRRVMGQGDLRPIAG 239
           + + L  + ++VL  GG  +  P   E L      I+++A+P D   R     + RP+  
Sbjct: 70  ISD-LTGRDSIVLATGGGAILRPENREALQNRGVVIYLRANPHDLWLRTRRDKN-RPLL- 126

Query: 240 QQMAAMEDLKAILEARRHLYGRADAVINTSGRSIADSVEEM 280
           Q       L+A+ E R  LY      +  +GR   + +  M
Sbjct: 127 QTEDPKARLEALYEVRDPLYRECAHFVIETGRPSVNGLVNM 167